Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0656 |
Symbol | ssB |
ID | 1182276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 710392 |
End bp | 710961 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392031 |
Product | single-stranded DNA-binding protein |
Protein accession | NP_790503 |
Protein GI | 28867884 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGTG GGGTTAACAA AGTCATATTG GTCGGTACAT GCGGCCAGGA TCCCGAAGTT CGCTACTTGC CTAACGGTAA CGCCGTGACC AACCTGAGTC TGGCAACCAG CGAACAATGG ACTGACAAGC AGAGCGGCCA GAAGGTCGAG AAGACCGAGT GGCACCGTGT TTCGATGTTC GGCAAGGTTG CCGAAATCGC CGGCGAATAC CTGCGCAAGG GTTCGCAGGT CTACATCGAA GGCAAGCTGC AGACCCGCGA ATGGGAAAAA GACGGCATCA AGCGCTACAC CACTGAAATC GTCGTCGACA TGCAAGGCAC CATGCAACTG CTGGGCGGCC GTCCACAGGG CGACGCTCAA CAAGGTCAGG GCGGTGGCGG CAACTACAAC CAGTCCGCGC CTCGTCCACA GCAGTCGCGC CCACAGCAAT CCGCGCCGCA GCAATCTGCC CCTCAGCAGA ACTACAACCA GCAACCGCCA CAACAGCGCG ATTCGCGCCC GGCGCCGCAA CAACAAGCGC CGCAGCCTGC TGCTGACTTT GACAGCTTTG ATGACGATAT TCCGTTCTAA
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Protein sequence | MARGVNKVIL VGTCGQDPEV RYLPNGNAVT NLSLATSEQW TDKQSGQKVE KTEWHRVSMF GKVAEIAGEY LRKGSQVYIE GKLQTREWEK DGIKRYTTEI VVDMQGTMQL LGGRPQGDAQ QGQGGGGNYN QSAPRPQQSR PQQSAPQQSA PQQNYNQQPP QQRDSRPAPQ QQAPQPAADF DSFDDDIPF
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