| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0655 |
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| Symbol | |
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| ID | 1182275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 708988 |
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| End bp | 710382 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392030 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_790502 |
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| Protein GI | 28867883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGATA CCCACAGCGA GCGTATGAGT GGCGGCGAGA CCCGCGCAGC AGGCGGTCTG
GCCCTGGTGT TCGCGTTCCG CATGCTTGGC ATGTTCATGG TTTTGCCGGT TCTGGCAACC
TATGGCATGG ACCTGGCGGG CGCGAGTCCT GCACTGATTG GTCTGGCGAT CGGCGCGTAT
GGCCTGACGC AGGCCGTACT GCAAATCCCG TTCGGGATTC TTTCCGACCG GATCGGCCGG
CGACCGATTA TTTATTTCGG GCTGATCATC TTCGCGCTCG GCAGCGTAGT GGCCGCCAAT
GCCGACTCGA TCTGGGGAAT TATCGGCGGA CGCGTCCTGC AAGGCGCGGG GGCTATCTCT
GCCGCTGTGA TGGCCTTGCT CTCTGACCTG ACCCGCGAAC AGCACCGCAC CAAGGCAATG
GCCATGATCG GCATGACCAT CGGTCTGTCG TTCGCTGTCG CCATGGTCGT TGGCCCGGTC
ATCACCGGCG CGTTCGGGCT GTCGGGGTTG TTTCTGGCAA CCGGAGGCAT GGCGTTGCTG
GGCATGCTGA TCGTCGCGTT CGTGGTGCCC AAGGCCAACG GTCCGCTGGT GCACCGCGAA
TCCGGCGTCG CCAAACAGGC ATTAGGCGCG ACGTTGCGTC ACCCGGACCT GCTGCGCCTG
GATTTGGGTA TCTTCGTGTT GCATGCCATG CTCATGTCCA GCTTCGTGGC CTTGCCGCTG
GCGCTGGTCG AAAAAGCCGG TTTGCCCAAG GAAGAGCACT GGTGGGTCTA CCTGACCGCC
TTGCTGGTTT CCTTCTTCGC GATGATCCCG TTCATCATCT ATGGCGAGAA GAAACGTCAA
ATGAAGCGCG TTCTGCTCGG CGCCGTGTTT GTTCTGATGC TGTCTGAGCT ATTCTTCTGG
GCATACGGCG ATACGTTGCG GGCACTGGTC ATCGGGACAG TGGTATTCTT CACTGCGTTC
AACCTGCTGG AAGCGTCCTT GCCGTCGCTG ATCAGCAAAG TTTCACCGGC GGGCGGAAAA
GGCACCGCGA TGGGAGTTTA TTCCACCAGC CAGTTTCTTG GTTCGGCCGC AGGTGGGATA
CTGGGCGGCT GGTTGTTCCA GCACGGTGGG CTTGATGTGG TGTTCCTTGG CGGTGCAGCC
ATGGCCGCCG TCTGGCTCGC CTTCGCAGTG ACCATGCGAG AACCGCCTTA CGTGACCAGC
CTACGTCTGC CGTTGTCGCC GCAGGCGCAG CGTGAAGCAG GCCTGGCGGA GCGTTTGATG
TCCGTAGCAG GCGTGACAGA TGCAGTGGTG GTTGCCGAAG AGGCAGCCAT CTACATAAAA
CTCGACACAA AATTATTGGA TCGCGCCTCT CTCGAGAAGC TGGTCAACCC AGCATCAGAA
GCGTGCGAAG CCTAG
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| Protein sequence | MHDTHSERMS GGETRAAGGL ALVFAFRMLG MFMVLPVLAT YGMDLAGASP ALIGLAIGAY
GLTQAVLQIP FGILSDRIGR RPIIYFGLII FALGSVVAAN ADSIWGIIGG RVLQGAGAIS
AAVMALLSDL TREQHRTKAM AMIGMTIGLS FAVAMVVGPV ITGAFGLSGL FLATGGMALL
GMLIVAFVVP KANGPLVHRE SGVAKQALGA TLRHPDLLRL DLGIFVLHAM LMSSFVALPL
ALVEKAGLPK EEHWWVYLTA LLVSFFAMIP FIIYGEKKRQ MKRVLLGAVF VLMLSELFFW
AYGDTLRALV IGTVVFFTAF NLLEASLPSL ISKVSPAGGK GTAMGVYSTS QFLGSAAGGI
LGGWLFQHGG LDVVFLGGAA MAAVWLAFAV TMREPPYVTS LRLPLSPQAQ REAGLAERLM
SVAGVTDAVV VAEEAAIYIK LDTKLLDRAS LEKLVNPASE ACEA
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