Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0654 |
Symbol | uvrA |
ID | 1182274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 706024 |
End bp | 709002 |
Gene Length | 2979 bp |
Protein Length | 992 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392029 |
Product | excinuclease ABC, A subunit |
Protein accession | NP_790501 |
Protein GI | 28867882 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTATCG TGCATGGAAT AACCTCGTGT GAACCGGCGG CGATTCTACC AGTCCCATCG TTGTACAGCA CATACGCGAC GCTTTGCCGC GTGATGGCTC GGAGCCGTAT ACTCCGTCGT TTATGCCCGC CAAGCGAGGC CGCAGTGGAC AAGATCCTGA TACGTGGGGC ACGAACCCAC AACCTGAAAA ATATTGACCT GACACTTCCC CGCAACAAAC TGATCGTTAT CACCGGGCTC TCCGGCTCAG GCAAGTCTTC GCTGGCTTTC GATACGCTGT ATGCCGAAGG GCAACGCCGT TACGTCGAGT CGCTGTCTGC CTATGCACGA CAGTTTCTGT CGATGATGGA GAAGCCGGAC GTCGATACGA TCGAAGGTCT GTCGCCGGCC ATTTCCATCG AGCAGAAATC CACGTCGCAC AACCCGCGCT CGACCGTGGG CACGATTACC GAGATTTACG ATTACCTGCG TCTTTTATAT GCGCGGGTCG GACAGCCTCG CTGCCCGGAT CACGATATTC CGCTGGAAGC CCAGACCGTC AGCCAGATGG TTGACCTGGT GCTGACTCAA CCCGAAGGCA GCAAACTGAT GCTGCTGGCG CCGGTTATTC GCGAGCGCAA GGGTGAACAC CTTTCGGTAT TCGAAGAGCT GCGTGCGCAG GGTTTTGTGC GGGCGCGGGT TAACGGTCGG CTGTGTGAGC TGGATGAACT GCCGAAGCTG GACAAGCAGA AGAAGCACTC CATTGACGTG GTAGTGGACC GCTTCAAGGT TCGCGCCGAC CTGCAGCAGC GTCTGGCCGA GTCTTTCGAG ACGGCATTGA AGCTGGCAGA CGGCATTGCG CTGGTCGCAC CGATGGACGA CGAGCCAGGC GAAGAAGTAA TTTTCTCCGC CCGCTTCGCC TGCCCGATCT GTGGCCACGC GATCAGCGAG CTTGAACCCA AGCTGTTCTC CTTTAACAAC CCGGCTGGCG CATGCCCGAC CTGCGACGGT CTGGGCGTGA AGCAGTTCTT TGATATCAAG CGGCTGGTCA ACGCCGAGCT GACGCTGGCT GAAGGCGCGA TACGCGGCTG GGACAGGCGT AACGTCTATT ATTTCCAGAT GCTCGGCTCG CTGTCCAAGC ACTACGGTTT CAGCCTGGAA GTGCCGTTCA AAGAAATCCC GGCCGACATG CAGAAGGTTC TGCTTAATGG CAGCGGCTCG CAGAGTGTCG ACTTCCGCTA TCTGAATGAT CGCGGCGATA TCGTCAAACG TGCGCACCCG TTCGAAGGCA TCGTGCCGAA TCTGGAACGT CGCTATCGGG AAACCGAATC AGCGACCGTG CGCGAGGAGC TGGCCAAGTT TCTCGGTACA CAGCCCTGCC CTGACTGCCG CGGCACTCGC CTGCGTCGCG AGGCACGTCA TGTGTGGGTG GGTGAAAAGA CCTTGCCTGC GGTGACCAAT CTGCCGATTG GCGACGCCAC GCATTATTTT GAAACGCTGA AGCTGACCGG CCGACGCGGC GAAATTGCCG ACAAGATTCT CAAAGAGATC CGCGAGCGTT TGCAGTTTCT GGTAAACGTC GGTCTGGACT ACCTGACCCT GGATCGCAGC GCAGACACGC TGTCTGGCGG TGAAGCGCAG CGCATTCGTC TGGCCAGTCA GATCGGTGCG GGCCTGGTCG GAGTGATGTA CATCCTCGAT GAGCCGTCTA TTGGCCTGCA TCAGCGCGAC AACGACCGTT TGCTGGGCAC GCTCAAGCAC CTGCGCGACA TCGGCAACAC GGTGATTGTG GTCGAGCATG ATGAAGATGC GATTCGTCTC GCCGACTACG TGGTCGATAT CGGCCCTGGC GCTGGCGTGC ACGGCGGGCA TATCGTTGCC GAAGGCACGC CGGACGAGGT GATGGCGCAC CCTGACTCAC TGACCGGCAA ATACCTGTCG GGACGTGTGA AGATCGCCGT ACCCGCCAAG CGCACGCCCC GCAACAAGAA GCTGTCGTTG ACACTCAAGG GTGCGCGTGG CAACAACCTG CAGAACGTCA ACCTCGACAT TCCGATTGGC CTGCTGACCT GTGTGACGGG CGTTTCCGGT TCGGGCAAGT CGACGCTGAT CAACAACACG CTGTTCCCGC TGAGTGCTAC GGCGCTCAAC GGCGCAACGA CGCTTGAGGC TGCCGCTCAC GACAGCATCA ACGGCCTGCA GCATCTGGAC AAGGTCGTGG ACATCGATCA GAGCCCTATC GGTCGTACGC CACGCTCCAA CCCGGCGACT TATACCGGGC TGTTCACGCC GATTCGCGAA CTGTTTGCCG GTGTGCCGGA ATCGCGCTCG CGGGGCTATG GCCCGGGACG GTTCTCGTTC AACGTCAAGG GCGGTCGTTG CGAAGCGTGT CAGGGCGATG GCTTGATCAA GGTCGAGATG CACTTTCTGC CGGACATCTA TGTGCCGTGC GATGTGTGCA AGAGCAAGCG CTACAACCGT GAAACCCTTG AGATCAAATA CAAGGGCAAG AACGTCCACG AAGTGCTTGA GATGACCATC GAAGAAGCGC GCGAGTTCTT CGACGCCGTC CCTGCACTGG CGCGCAAGCT GCAAACCCTG ATGGACGTAG GGCTTTCCTA TATCAAGCTG GGTCAATCGG CGACCACCCT GTCGGGCGGT GAAGCTCAGC GCGTCAAGCT GTCGCGTGAG CTGTCCAAGC GCGACACTGG CAAGACGCTT TATATCCTCG ACGAACCGAC TACCGGCCTG CACTTTGCCG ATATTCAACA GTTGCTGGAT GTCCTGCATC GCCTGCGCGA CCATGGCAAC ACGGTGGTGG TAATCGAGCA CAATCTGGAT GTCATCAAGA CGGCAGACTG GTTGGTGGAC CTGGGGCCGG AAGGCGGCTC AAGAGGCGGG CAGATCATTG CGACCGGCAC ACCTGAGCAG GTCGCCGAGA TGGAGCAGTC GTATACCGGG CATTACCTCA AGCCTCTGTT GATCAGAGAC AGGGCTTAA
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Protein sequence | MGIVHGITSC EPAAILPVPS LYSTYATLCR VMARSRILRR LCPPSEAAVD KILIRGARTH NLKNIDLTLP RNKLIVITGL SGSGKSSLAF DTLYAEGQRR YVESLSAYAR QFLSMMEKPD VDTIEGLSPA ISIEQKSTSH NPRSTVGTIT EIYDYLRLLY ARVGQPRCPD HDIPLEAQTV SQMVDLVLTQ PEGSKLMLLA PVIRERKGEH LSVFEELRAQ GFVRARVNGR LCELDELPKL DKQKKHSIDV VVDRFKVRAD LQQRLAESFE TALKLADGIA LVAPMDDEPG EEVIFSARFA CPICGHAISE LEPKLFSFNN PAGACPTCDG LGVKQFFDIK RLVNAELTLA EGAIRGWDRR NVYYFQMLGS LSKHYGFSLE VPFKEIPADM QKVLLNGSGS QSVDFRYLND RGDIVKRAHP FEGIVPNLER RYRETESATV REELAKFLGT QPCPDCRGTR LRREARHVWV GEKTLPAVTN LPIGDATHYF ETLKLTGRRG EIADKILKEI RERLQFLVNV GLDYLTLDRS ADTLSGGEAQ RIRLASQIGA GLVGVMYILD EPSIGLHQRD NDRLLGTLKH LRDIGNTVIV VEHDEDAIRL ADYVVDIGPG AGVHGGHIVA EGTPDEVMAH PDSLTGKYLS GRVKIAVPAK RTPRNKKLSL TLKGARGNNL QNVNLDIPIG LLTCVTGVSG SGKSTLINNT LFPLSATALN GATTLEAAAH DSINGLQHLD KVVDIDQSPI GRTPRSNPAT YTGLFTPIRE LFAGVPESRS RGYGPGRFSF NVKGGRCEAC QGDGLIKVEM HFLPDIYVPC DVCKSKRYNR ETLEIKYKGK NVHEVLEMTI EEAREFFDAV PALARKLQTL MDVGLSYIKL GQSATTLSGG EAQRVKLSRE LSKRDTGKTL YILDEPTTGL HFADIQQLLD VLHRLRDHGN TVVVIEHNLD VIKTADWLVD LGPEGGSRGG QIIATGTPEQ VAEMEQSYTG HYLKPLLIRD RA
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