| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0644 |
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| Symbol | rpmD |
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| ID | 1182264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 700111 |
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| End bp | 700287 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637392019 |
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| Product | ribosomal protein L30 |
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| Protein accession | NP_790491 |
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| Protein GI | 28867872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACCG TTAAAGTAAC GCTGATCAAA AGCATGACCG GCCGCATCCC TAATCACAGA
TTGTGCATTA AGGGTTTGGG TCTGCGTCGC ATCGGTCACA CTGTAGAAGT CCTGGATACT
CCCGAAAATC GCGGGATGAT CAACAAGGCT TACTACATGC TGCGAGTCGA GGGTTAA
|
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| Protein sequence | MATVKVTLIK SMTGRIPNHR LCIKGLGLRR IGHTVEVLDT PENRGMINKA YYMLRVEG
|
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| |