| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0638 |
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| Symbol | rplE |
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| ID | 1182258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 697232 |
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| End bp | 697771 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637392013 |
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| Product | ribosomal protein L5 |
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| Protein accession | NP_790485 |
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| Protein GI | 28867866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000106157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGAC TAAAAGAGAT TTATCGGAAG GAAATCGCTC CGAAGCTTAA GGAAGAACTT
AAGCTTGGGA ACGTGATGGA AGTTCCGCGC GTTACCAAAA TCACCCTGAA CATGGGTCTG
GGCGAGGCGA TCGGTGACAA AAAAGTCATC GAGAACGCTG TTGCTGACCT GGAAAAGATC
ACCGGTCAAA AAGTCGTTGT GACTTACGCT CGGAAATCCA TCGCTGGCTT TAAAGTCCGT
GAAGGTTGGC CGATCGGCGT CAAAGTGACT CTGCGCCGCG ATCGTATGTA TGAGTTCCTG
GATCGTCTGC TGTCGATCTC CCTGCCTCGG GTTCGCGACT TCCGCGGCCT GAATGCCAAG
TCCTTCGATG GTCGTGGTAA CTACAGCATG GGCGTAAAAG AGCAGATCAT TTTCCCGGAA
ATCGATTACG ACAAGATCGA TGCTCTCCGC GGTCTGGACA TTACCCTGAC CACCACTGCC
AAGAACGATG ATGAAGGTCG CGCATTGCTG CGTGCTTTCA AATTCCCGTT CCGCAACTGA
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| Protein sequence | MARLKEIYRK EIAPKLKEEL KLGNVMEVPR VTKITLNMGL GEAIGDKKVI ENAVADLEKI
TGQKVVVTYA RKSIAGFKVR EGWPIGVKVT LRRDRMYEFL DRLLSISLPR VRDFRGLNAK
SFDGRGNYSM GVKEQIIFPE IDYDKIDALR GLDITLTTTA KNDDEGRALL RAFKFPFRN
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