| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0637 |
|---|
| Symbol | rplX |
|---|
| ID | 1182257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 696897 |
|---|
| End bp | 697211 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637392012 |
|---|
| Product | ribosomal protein L24 |
|---|
| Protein accession | NP_790484 |
|---|
| Protein GI | 28867865 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0198] Ribosomal protein L24 |
|---|
| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000374833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGA TTCGTCGTGA CGACGAGATC ATCGTGATCG CCGGTAAAGA CAAAGGTAAG
CGCGGTAAGG TGCTCAAGGT TCTCGCTGAC GACCGTCTGG TCGTTGGTGG GATCAACCTG
GTGAAGCGTC ATACCAAGCC AAACCCGATG TCGGGCGTAC AGGGCGGTAT CGTCGAGAAA
GAAGCGCCAT TGCACGCTTC TAACGTCGCT ATTTTCAACG GCGCAACCAA CAAGGCAGAC
CGCGTTGGTT TCAAAGTTGA AGATGGCAAG AAAATTCGTG TCTTCAAGTC GACCCAAAAA
GCGGTTGATG CTTGA
|
|---|
| Protein sequence | MQKIRRDDEI IVIAGKDKGK RGKVLKVLAD DRLVVGGINL VKRHTKPNPM SGVQGGIVEK
EAPLHASNVA IFNGATNKAD RVGFKVEDGK KIRVFKSTQK AVDA
|
|---|
| |