| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0629 |
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| Symbol | rplB |
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| ID | 1182249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 693445 |
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| End bp | 694269 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392004 |
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| Product | ribosomal protein L2 |
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| Protein accession | NP_790476 |
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| Protein GI | 28867857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000177607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCG TTAAATGCAA ACCGACTTCC CCTGGCCGCC GTTTTGTGGT CAAGGTGGTC
AACCAGGAGC TGCATAAAGG CGCTCCTCAC GCACCGCTGC TCGAGAAAAA ATCGAAGACT
GGTGGTCGTA ACAACAATGG TCGTATTACT ACCCGTCATA TCGGTGGTGG CCATAAGCAG
CATTATCGTC TGGTCGATTT CCGTCGCAAC GACAAGGATG GCATTACTGC CACCGTCGAG
CGTATTGAAT ACGATCCAAA CCGTACTGCT CACATTGCTC TGCTGCTTTA CGCAGACGGC
GAGCGCCGCT ACATCATCGC CCCTAAAGGC GTGAGTGCTG GCGACCAGCT GATTGCAGGT
GCTTTGGCAC CAATCAAGCC GGGCAACGCT CTTCAACTGC GTAATATTCC AGTTGGTAGC
ACCGTGCACG GCATCGAACT GAAGCCAGGT AAAGGCGCAC AGATCGCTCG TTCTGCTGGT
GCTTCTGCAC AGCTGATCGC TCGTGAAGGT GTGTACGTGA CCCTGCGTCT TCGCTCCGGT
GAAATGCGTA AAGTACTGTC TGAATGCCGT GCAACGCTGG GCGAAGTCTC GAACTCCGAG
CACAGCCTTC GTTCGCTGGG TAAAGCTGGT GCCAAACGCT GGCGTGGCGT TCGCCCAACC
GTTCGTGGTG TTGCCATGAA CCCGGTTGAC CACCCACATG GTGGTGGTGA AGGTCGTACC
TCTGGTGGTC GTCATCCGGT ATCGCCGTGG GGCTTCCCGA CTAAGGGCGC GAAGACTCGT
GGTAATAAGC GTACCGACAA AATGATCGTC CGTCGTCGCA AGTAA
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| Protein sequence | MAIVKCKPTS PGRRFVVKVV NQELHKGAPH APLLEKKSKT GGRNNNGRIT TRHIGGGHKQ
HYRLVDFRRN DKDGITATVE RIEYDPNRTA HIALLLYADG ERRYIIAPKG VSAGDQLIAG
ALAPIKPGNA LQLRNIPVGS TVHGIELKPG KGAQIARSAG ASAQLIAREG VYVTLRLRSG
EMRKVLSECR ATLGEVSNSE HSLRSLGKAG AKRWRGVRPT VRGVAMNPVD HPHGGGEGRT
SGGRHPVSPW GFPTKGAKTR GNKRTDKMIV RRRK
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