| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0613 |
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| Symbol | secE |
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| ID | 1182233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 674963 |
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| End bp | 675331 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637391988 |
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| Product | preprotein translocase, SecE subunit |
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| Protein accession | NP_790460 |
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| Protein GI | 28867841 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.222765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCCA AGGCTGAAGC ATCAGACTCT CGCTTTGATT TGCTGAAATG GCTCCTGGTA
GTCATTTTGG TAGTCGTGGG TGTTGTCGGT AATCAGTATT ACTCTGCTGA GCCGATCCTG
TACCGTGTTC TCGCTCTCCT TGTGATTGCC GCAGCAGCTG CATTTGTAGC GCTGCAGACT
GGCAAGGGCA AAGCTTTCTT CGTTTTGGCG AAAGAAGCGC GTGCAGAGAT CCGTAAAGTC
GTTTGGCCTA CTCGCCAAGA AACCACGCAA ACCACGTTGA TAGTTGTGGC TGTTGTGCTG
GTTATGGCGT TGCTGTTGTG GGGGCTTGAT TCCCTGCTCG GCTGGCTTGT TTCCTCGATA
GTTGGCTAA
|
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| Protein sequence | MNPKAEASDS RFDLLKWLLV VILVVVGVVG NQYYSAEPIL YRVLALLVIA AAAAFVALQT
GKGKAFFVLA KEARAEIRKV VWPTRQETTQ TTLIVVAVVL VMALLLWGLD SLLGWLVSSI
VG
|
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