Gene PSPTO_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0601 
Symbol 
ID1182212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp658212 
End bp658988 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID637391967 
Productoxidoreductase, short chain dehydrogenase/reductase family 
Protein accessionNP_790448 
Protein GI28867829 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTT ACGCCCTGAT CACCGGCGCT TCCAGCGGCA TAGGTCTGGC CATGGCCGAG 
GCGCTGGCAC GTCGCGGTCA CAGCTTGATC CTCGTTGCCC GCCAGCGCGA TCTGCTGGAA
ACAATTGCCC TGGAGCTGAC GCAGCGTTTC GGCGTAGAAG TGCTGTTTCG CGCATGCGAC
CTCGGTGAGC CGCTTCGTCT TTCGGGCTTC CTGCTGGAAC TGGAAGACGG CGCGCATCAG
ATTGACCTGC TGGTGAATGC GGCGGGCATC GGCACCTGCG GACCGTTTCT GGCGCAGGAC
TGGAGTGCCG AACAGGACTT GATCGACCTG AACATCCTCG CGCTCACACG GCTTTGCCAT
ACGGTCGGTA ACCTGATGGC TATTCAGGGT GGCGGGCAGA TTCTCAATAT CGCTTCGGTG
GCTGCGTTTC AGCCCGGGCC GTGGATGAGC ACTTACTACG CCAGCAAGGC GTACGTGCTG
CACTTTTCCG AAGGGCTGCG CGAGGAAGTG AAGAAAGCCG GGGTCAAGGT GTCGGTATTG
TGTCCCGGCC CGACCAAAAG CGCTTTTTTC CGCACCGCAC AGTTGCAAGT GAACGTCGAC
AACCTGATGA GTGCCGAAGA AGTGGCGCTG TACACCGTTC GTGCACTCGA AAAAAACCGC
GCGGTGATCG TTCCAGGCTT CAGTAACAGG CTGTGGACCT TAAGCCCGCG TCTGGTTTCA
CGCTGGCTGG CTCGCCAGAT CAGCGGCTAC ATCAACAAGA AGTACTGCCC GCGCTGA
 
Protein sequence
MTRYALITGA SSGIGLAMAE ALARRGHSLI LVARQRDLLE TIALELTQRF GVEVLFRACD 
LGEPLRLSGF LLELEDGAHQ IDLLVNAAGI GTCGPFLAQD WSAEQDLIDL NILALTRLCH
TVGNLMAIQG GGQILNIASV AAFQPGPWMS TYYASKAYVL HFSEGLREEV KKAGVKVSVL
CPGPTKSAFF RTAQLQVNVD NLMSAEEVAL YTVRALEKNR AVIVPGFSNR LWTLSPRLVS
RWLARQISGY INKKYCPR