Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0600 |
Symbol | |
ID | 1182211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 657771 |
End bp | 658109 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637391966 |
Product | HIT family protein |
Protein accession | NP_790447 |
Protein GI | 28867828 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAACTT TGTTTACCAA GATCATCAAT CGGGAGATCC CGGCGAAGAT CATCTATGAA GATGATCAGG TACTGGCCTT TCACGACATC GCCCCACAGG CACCGGTGCA TTTTCTGGTC ATCCCGAAAA AGCCCATTCG TACTCTCAAC GACCTGACCG AAGAAGACAA AGGCCTGGCC GGGCATATCC TGTTCACTGC GCAGCGTCTG GCGATCGAAC TGGGCTGTGA GGAAGGCTTC CGTGTGGTCA TGAACTGCAA CGAGTTGGGC GGGCAGACCG TCTATCACAT TCACATGCAC GTACTGGGTC AGCGCCAGAT GAGCTGGCCG CCGGGCTGA
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Protein sequence | METLFTKIIN REIPAKIIYE DDQVLAFHDI APQAPVHFLV IPKKPIRTLN DLTEEDKGLA GHILFTAQRL AIELGCEEGF RVVMNCNELG GQTVYHIHMH VLGQRQMSWP PG
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