Gene PSPTO_0509 details

Gene Information

• Locus tag: PSPTO_0509
• Symbol: pqqE
• ID: 1182118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 557668
• End bp: 558837
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637391876
• Product: coenzyme PQQ synthesis protein E
• Protein accession: NP_790357
• Protein GI: 28867738
• COG category: [R] General function prediction only
• COG ID: [COG0535] Predicted Fe-S oxidoreductases
• TIGRFAM ID: [TIGR02109] coenzyme PQQ biosynthesis protein E

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTGATA TCGCGCCTGC TGCCCACAGC CCTTACATAC CGCCCACCCC GGAGGTCGGC 
CTGCCGCTGT GGCTGCTGGC CGAGCTGACC TATCGCTGCC CGCTACAATG CCCTTACTGC 
TCTAACCCGC TGGATTTCGC CAGGCAGGGT CAGGAGCTGA CTACCGAGCA GTGGTTCAAG 
GTCATGCAGG AAGCGCGTGA AATGGGGGCC GCCCAGATCG GTTTTTCCGG TGGCGAGCCG 
CTGGTGCGTC AGGACCTGGC CGAGCTGATC GCCGAAGCTC GGCGATTGGG TTTTTACACC 
AACCTGATTA CCTCAGGCAT CGGCCTGACA GAAGAAAAGA TCATCGCCTT CAAAAAGGCC 
GGGCTGGACC ATATCCAGAT CAGCTTTCAG GCCAGCGACG AGCAAGTGAA CAACATGCTC 
GCCGGCTCGA AAAAAGCCTT TGCGCAAAAG CTGGAGATGG CCAAAGCGGT GAAGAAGCAC 
GGCTATCCGA TGGTGCTGAA TTTCGTGACC CACCGGCACA ACATCGACCG GATCGACAAG 
ATCATCGAGC TGTGTCTGGC GCTGGAAGCG GACTTCGTCG AGCTGGCAAC CTGTCAGTTC 
TATGGCTGGG CGCACCTGAA CCGCGTCGGT CTGCTGCCCA CCAAGGATCA ACTGGTGCGC 
GCCGAAGCGG TCACCAATGA GTACCGCGAC CAGTTGGCCG CGCAAGACCA TCCCTGCAAA 
CTGATCTTCG TGACCCCCGA TTACTACGAA GAGCGTCCCA AGGCCTGCAT GAACGGCTGG 
GGCAATATCT TCCTGACCGT CACCCCGGAC GGCACCGCCC TGCCCTGTCA CGGCGCGCGA 
CAGATGCCGA TCCAGTTTCC CAATGTGCGC GAACACAGCA TGCAGCACAT CTGGTACGAC 
TCGTTCGGCT TCAACCGCTT TCGCGGTTAC GACTGGATGC CCGAGCCGTG CCGTTCGTGC 
GACGAGAAGG AAAAGGACTT CGGCGGCTGT CGCTGCCAGG CGTTCATGCT GACCGGCGAT 
GCTGCCAATG CCGACCCGGT GTGCAGCAAG TCTTATCACC ACGGGATCAT CACTCAGGCT 
CGCGACGAGT CCGAAACCGC TACTCAAACC ATTGAAGAGC TGGCCTTTCG CAATGACCGA 
AACTCACGCC TCATCGCAAA ATCTTCCTGA 

 

Protein sequence

MSDIAPAAHS PYIPPTPEVG LPLWLLAELT YRCPLQCPYC SNPLDFARQG QELTTEQWFK 
VMQEAREMGA AQIGFSGGEP LVRQDLAELI AEARRLGFYT NLITSGIGLT EEKIIAFKKA 
GLDHIQISFQ ASDEQVNNML AGSKKAFAQK LEMAKAVKKH GYPMVLNFVT HRHNIDRIDK 
IIELCLALEA DFVELATCQF YGWAHLNRVG LLPTKDQLVR AEAVTNEYRD QLAAQDHPCK 
LIFVTPDYYE ERPKACMNGW GNIFLTVTPD GTALPCHGAR QMPIQFPNVR EHSMQHIWYD 
SFGFNRFRGY DWMPEPCRSC DEKEKDFGGC RCQAFMLTGD AANADPVCSK SYHHGIITQA 
RDESETATQT IEELAFRNDR NSRLIAKSS