| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0500 |
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| Symbol | |
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| ID | 1182109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 546382 |
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| End bp | 548187 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391868 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_790349 |
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| Protein GI | 28867730 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.837085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACT ACAAGGCCCC CTTGCGTGAT ATTCGTTTCG TCCGTGACGA GCTGCTCGGT
TACGAAGCGC ACTATCAGAG TCTGCCAGCC TGTCACGACG CCACTCCGGA CATGGTCGAC
GCCATTCTTG AAGAGGGTGC CAAGTTCTGC GAGCAGGTGC TTGCGCCGCT GAACCGTGTT
GGCGATACCG AGGGTTGCAC CTGGAGCGAG TCGGGCGTGA AGACGCCGTC CGGTTTCAAG
CAAGCCTACA AGCAGTTCGT CGAAGGTGGC TGGCCGAGCC TTGCGCATGA CGTCGCGCAC
GGCGGTCAGG GCTTGCCTGA GTCGCTGGGC CTGGCAGTCA GCGAGATGGT CGGCGAAGCC
AACTGGTCGT GGGGCATGTA CCCAGGCCTG TCGCATGGTG CGATGAACAC CATCTCCGAG
CACGGCACGC CCGAGCAGCA GGACGCGTAC CTGACCAAGC TGGTCTCCGG CGAATGGACC
GGCACCATGT GCCTGACCGA ATCCCACTGC GGTACCGACC TGGGCATGTT GCGCACCAAG
GCCGAACCTC AGGCTGACGG CACCTACAAG GTGACCGGCA CCAAGATCTT CATTTCTGCT
GGCGAACACG ACATGGCCGA TAACATCGTC CACATCGTGC TGGCCCGCCT GCCGGATGCA
CCGGCTGGCA CCAAAGGCAT TTCGCTGTTC ATCGTGCCCA AGTTCCTCTC GGCTGCCGAC
GGCGGTGTGG GCGAGCGCAA CGCGGTGAAC TGCGGCTCGA TCGAACACAA GATGGGCATT
CACGGCAACG CCACGTGCGT GATGAACTTC GACGGCGCTA CCGGCTACCT GATCGGCCCG
CCGAACAAGG GCCTGAACTG CATGTTCACG TTCATGAACA CAGCGCGTCT GGGCACTGCA
CTGCAAGGTC TGGCGCATGC CGAGGTCGCG TTTCAGGGCG GTCTGAAATA CGCCCGGGAC
CGTCTGCAGA TGCGTTCGCT GACTGGCCCT AAGGCGCCGG AAAAAGCAGC TGACCCGATC
ATCGTTCACC CTGACGTGCG CCGTATGCTG CTGACCATGA AGGCCTTCGC TGAAGGCACT
CGGGCCATGG TGTACTTCAC CGCCAAACAG GTCGATATCG TCAAGTACAG CGAAGACCCG
GAGCAGAAGA AGTCCGCCGA CGCGCTGCTG GCGTTCATGA CACCGATTGC CAAGGCTTTC
ATGACCGAAG TGGGTTTTGA AGCTGCCAAC CACGGCGTGC AGATCTACGG CGGTCATGGC
TTTATCGCCG AGTGGGGCAT GGAGCAGAAC GTTCGCGACA GCCGCATTTC GATGCTGTAC
GAAGGCACCA CCGGTATCCA GGCCCTCGAC CTGCTGGGCC GTAAAGTGCT GATGACCCAG
GGTGAAGCGT TGAAGGGCTT CACCAAGATT GTCCACAAGT TCTGCCAGAG CAATGAAGGT
AACGAAGGCG TTCAGGAATT CGTTACACCA TTGGCTGCAT TGAACAAGGA ATGGGGCGAG
CTGACCCTGA AAGTCGGCAT GGCCGCGATT AAGGACCGTG AAGAAGTCGG TGCTGCTTCG
GTGGATTACA TCATGTATTC CGGTTATGCC TGCCTGGCTT ATTTCTGGGC CGACATGGCG
CGTCTGGCTG CTGAAAAACT GGCAGCCGGT ACGGCTGACG AAGCGTTTTA CCGTGCCAAG
ATCCAGACGG CGCGCTTCTA CTTCCAGCGC ATCCTGCCGC GCACCCGCAC CCACGTTGCC
GCCATCCTGT CGGGCGCTGG CAACCTGATG GACATGAAAG AAGAGGACTT CGGCCTGGCT
TACTAA
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| Protein sequence | MPDYKAPLRD IRFVRDELLG YEAHYQSLPA CHDATPDMVD AILEEGAKFC EQVLAPLNRV
GDTEGCTWSE SGVKTPSGFK QAYKQFVEGG WPSLAHDVAH GGQGLPESLG LAVSEMVGEA
NWSWGMYPGL SHGAMNTISE HGTPEQQDAY LTKLVSGEWT GTMCLTESHC GTDLGMLRTK
AEPQADGTYK VTGTKIFISA GEHDMADNIV HIVLARLPDA PAGTKGISLF IVPKFLSAAD
GGVGERNAVN CGSIEHKMGI HGNATCVMNF DGATGYLIGP PNKGLNCMFT FMNTARLGTA
LQGLAHAEVA FQGGLKYARD RLQMRSLTGP KAPEKAADPI IVHPDVRRML LTMKAFAEGT
RAMVYFTAKQ VDIVKYSEDP EQKKSADALL AFMTPIAKAF MTEVGFEAAN HGVQIYGGHG
FIAEWGMEQN VRDSRISMLY EGTTGIQALD LLGRKVLMTQ GEALKGFTKI VHKFCQSNEG
NEGVQEFVTP LAALNKEWGE LTLKVGMAAI KDREEVGAAS VDYIMYSGYA CLAYFWADMA
RLAAEKLAAG TADEAFYRAK IQTARFYFQR ILPRTRTHVA AILSGAGNLM DMKEEDFGLA
Y
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