Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0493 |
Symbol | |
ID | 1182102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 540207 |
End bp | 540941 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391861 |
Product | competence protein ComF, putative |
Protein accession | NP_790342 |
Protein GI | 28867723 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGTC AACCCAGCTA TGATCGCCAG GTTTACATCT GGTTAAAAAA CAAACAAACC TGCTTATTGT GCGATGAGCG CAGCGAGGTC CCAGCGCCCA TCTGCGTGCC CTGCGAAGCC GAGTTGCCTT GGCTTGGCGA GCAGTGCGAA TACTGCGCGC TGCCCTTGCC GGTCTTCGGC CTGAGCTGCG GGCAATGCAG CAAACGTCCT CCGGCCTTTG CCCAAGTGGT TGCGCCGTGG CTGTATGAGT TTCCGATAGA CAGCCTGATT ACGCGCTTCA AACACAACCG CAAATGGCCC ATGGGGCGGC TGCTCGCTGA GCTGTGCGGC CAGTTTCTGC AACACCGCTT CGATGAAGGC CTGCCGCGTC CGGACTACCT GCTGCCGGTG CCGCTGGCCA ACAAACGCTT GCGCCAGCGC GGTTACAACC AGGCGGGAAT GCTGGCCGGA TGGCTGGGCA AACAGTTGCA ACTGCCTGTC GATGAACAGC ATGTAGTACG CAGCCGAGAA ACCGCAGCAC AACAGGGTCT CGACGCCAAA GCGCGCAAAC GCAACCTGCG CGGCGCATTC GCATTGATTG ATCCCGATTG GGTGCACGGC AAACACCTGG CGTTGGTCGA TGACGTATTG ACCACCGGCT CGACGGCAGA GGTCATTGCT CGATTATTGA ACAGCGCGGG CGCCCGGCGC GTGGACGTCT ATTGCCTGGC GCGGACGCCC AAGCCGGGGG ATTGA
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Protein sequence | MRCQPSYDRQ VYIWLKNKQT CLLCDERSEV PAPICVPCEA ELPWLGEQCE YCALPLPVFG LSCGQCSKRP PAFAQVVAPW LYEFPIDSLI TRFKHNRKWP MGRLLAELCG QFLQHRFDEG LPRPDYLLPV PLANKRLRQR GYNQAGMLAG WLGKQLQLPV DEQHVVRSRE TAAQQGLDAK ARKRNLRGAF ALIDPDWVHG KHLALVDDVL TTGSTAEVIA RLLNSAGARR VDVYCLARTP KPGD
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