| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0466 |
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| Symbol | |
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| ID | 1182075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 512022 |
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| End bp | 513647 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391834 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_790315 |
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| Protein GI | 28867696 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTGC GAAATATGAA CATCGCGCCC CGAGCGTTTC TTGGATTCGC CATCATCGGC
ACACTCATGC TGATCCTCGG TGTATTCGCC CTGTCCCAGA TGAACAAGAT CCGTGGCGCG
ACTGAAGACC TGGCCAACGG CAATGTGCCC AGTATCAAAA GCCTCGATCG ATTCGCAGAA
GTCAGTATCC GTTTGCGCGT GTTGTCTTAC CGACTGCTGG TCAACCGCGA CCCGGAAACC
CAGCAGAAGA CCATCGACCT GCTGGCGATG CGCAACAAGC AGATCACCGA CGCTCAGGCG
ATTTACGAGA AGCTGATCAG CGACCCCGAC GAGCGCAATC TTTACGGCCA GTACGTGCAA
CTGCTGGGGC AGTATCGCCA GCTTGAAGAG CGCCTGAAGA CGCTGACCCG CGCCAACAAA
ATCGAAGAGC TGCAGAGCCT GCTCAACAAC GAACTGCTCA GCAACTCCGA TCAGATGAAC
GTCGTGCTCG GCAAGCTGGT AGAGATCAAT ACTGCTCAAT TGAACCAGGT CAAAAAGGAT
GCTTCCCGCG AGTACGACTC AGCATTCAAT ATGGTCATCG GGCTGCTCAT AGCTGCCACG
CTGCTCACCA TCGTGTTTGC CTGGATGCTG ATCAAAAGCA TTACCACGCC GATCGCCACG
GCGCTGCATG CGGCGGAAAC CATCGCGAAA GGTAACCTGA CCCAGCCGAT CCAGATTGAT
GGCAGCGACG AAGCCGGTCG TTTACTGCTG GCCATGAAAA CCATGCAGGA CAAACTGCGC
GACACGCTGC AGGGCATTTC CGGTTCGGCC ACGCAACTGG CCTCGGCGGC CGAAGAGCTG
AATGCCGTTA CCGACGAAAG TGCACGTGGG CTGGTGCAGC AGAACAACGA AATCGAGCAG
GCTGCCACTG CGGTCAACGA AATGACCAGC GCCGTGGAAG AAGTCGCCCG CAACGCTGTC
AGTACGTCGC AAGCGTCTCG CAATGCGGCG ACCTCTGCCG GTGACGGTCG TGATCTGGTT
CAGGAAACCG TCAGCGCCAT CGAACGCATG AGCGGTGACG TGAAAGGCAC GGCTGAACTG
ATCATCAACC TGGCTACTGA GTCTCGGGAT ATCGGCAAGG TGCTGGACGT GATCCGCGGC
CTGGCCGACC AGACCAACCT GCTGGCGCTC AACGCCGCCA TCGAAGCTGC ACGTGCCGGT
GAAGCCGGAC GCGGTTTTGC GGTAGTGGCC GACGAAGTGC GCGCTTTGGC ACACCGCACG
CAGCAATCGA CCAGCGAAAT CGAACGCATG ATCGGCAGCA TTCAGAGCGG CACGGAACAG
GCAGTAAGCT CGATGCGCAA CAGCACCGAA CGCGCCGAAT CCACCTTGAA CATCGCCAAA
GGCGCGGGCA TGGCGCTGAA CACCATCAAT GTCGCGGTCG AAGAGATCAA CGAACGCAAT
ATGGTCATCG CCAGCGCCGC TGAAGAGCAA GCGCAAGTCG CACGCGAAGT GGACCGCAAC
CTGGTGAACA TCCGCGACCT CTCGGCACAA TCAACCAGCG GCGCCAACCA GACCAGCGCA
GCCAGCACCG AGCTTTCCCG CCTGGCCGTG GACCTCAACA GCATGGTGTC GCGCTTCGCG
CTTTAA
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| Protein sequence | MSLRNMNIAP RAFLGFAIIG TLMLILGVFA LSQMNKIRGA TEDLANGNVP SIKSLDRFAE
VSIRLRVLSY RLLVNRDPET QQKTIDLLAM RNKQITDAQA IYEKLISDPD ERNLYGQYVQ
LLGQYRQLEE RLKTLTRANK IEELQSLLNN ELLSNSDQMN VVLGKLVEIN TAQLNQVKKD
ASREYDSAFN MVIGLLIAAT LLTIVFAWML IKSITTPIAT ALHAAETIAK GNLTQPIQID
GSDEAGRLLL AMKTMQDKLR DTLQGISGSA TQLASAAEEL NAVTDESARG LVQQNNEIEQ
AATAVNEMTS AVEEVARNAV STSQASRNAA TSAGDGRDLV QETVSAIERM SGDVKGTAEL
IINLATESRD IGKVLDVIRG LADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRALAHRT
QQSTSEIERM IGSIQSGTEQ AVSSMRNSTE RAESTLNIAK GAGMALNTIN VAVEEINERN
MVIASAAEEQ AQVAREVDRN LVNIRDLSAQ STSGANQTSA ASTELSRLAV DLNSMVSRFA
L
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