Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0452 |
Symbol | |
ID | 1182061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 495158 |
End bp | 496057 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391820 |
Product | acyltransferase family protein |
Protein accession | NP_790301 |
Protein GI | 28867682 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.621143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGTC TGCTCACCGG CTGTTTCGTT GCCATTTTGT TGCTGATCAA CACACTCGTG CTGATCGGCC CGCTACTGAT TTTTGCGTTG CTCAAGCTGC TGTTCAGAGG TCGAATGCGC GATCGTTGCT CAACGGGCGC GATGTGGGTC GCCGAGACCT GGGCCGAAAT CGACAAGCTC ATTTTCGCCT GGTGCGTGCC GACGCAATGG GACATCCGCG GCGATAAAGG CCTGCGCAGC GACACCTCGT ATCTGGTCAT CAGCAATCAC CAGTCTTGGG TCGATATCCC GGCGCTGATT CAGGCGCTTA ACCGCCGCAC GCCGTTCTTC AAGTTTTTCC TGAAAAAGGA ACTGATCTGG GTGCCGTTGC TGGGGCTGGC GTGGTGGGGG CTGGATTACC CATTCATGAA GCGCTACAGC AAGGCTTTTC TGGCAAAGCA CCCGGAACTC AAAGGCAAGG ACCTGGAAAT CACCCAGGCG GCCTGCGAAC TGTTCAAGCG CCAGCCGGTG ACCATCGTCA ACTACCTGGA AGGCACACGT TTCACACCGG CAAAACATGC CGCCCAGGCT TCGCCATACG CCAGCCTGCT CAAGCCCAAG GCAGGTGGCG TTGCATTTGT GCTGGCGGCA ATGGGCGAAC AACTGGACGC CATCCTGGAT GTCACCGTGG TCTATCCTGG CTCAAGCATT CCGGGGTTCT GGGACATGCT TTGCGGGCAG GTTGCCAAGG TGATCGTCGA CATCCAGACC CGCGAGCTGG ACCCTGCGCT GTGGCAGGGC GATTACGAGA ACGACCCGGT GTTTCGCGAG AAAGTGCAGG CTTGGGTCAA TCAGCTCTGG GTCGAGAAAG ATGCGCGTAT TGCGGCGTTG CGGCGTGAAT CAGCTGCCGG CACCCCATAA
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Protein sequence | MRRLLTGCFV AILLLINTLV LIGPLLIFAL LKLLFRGRMR DRCSTGAMWV AETWAEIDKL IFAWCVPTQW DIRGDKGLRS DTSYLVISNH QSWVDIPALI QALNRRTPFF KFFLKKELIW VPLLGLAWWG LDYPFMKRYS KAFLAKHPEL KGKDLEITQA ACELFKRQPV TIVNYLEGTR FTPAKHAAQA SPYASLLKPK AGGVAFVLAA MGEQLDAILD VTVVYPGSSI PGFWDMLCGQ VAKVIVDIQT RELDPALWQG DYENDPVFRE KVQAWVNQLW VEKDARIAAL RRESAAGTP
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