Gene PSPTO_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0452 
Symbol 
ID1182061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp495158 
End bp496057 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID637391820 
Productacyltransferase family protein 
Protein accessionNP_790301 
Protein GI28867682 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.621143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTC TGCTCACCGG CTGTTTCGTT GCCATTTTGT TGCTGATCAA CACACTCGTG 
CTGATCGGCC CGCTACTGAT TTTTGCGTTG CTCAAGCTGC TGTTCAGAGG TCGAATGCGC
GATCGTTGCT CAACGGGCGC GATGTGGGTC GCCGAGACCT GGGCCGAAAT CGACAAGCTC
ATTTTCGCCT GGTGCGTGCC GACGCAATGG GACATCCGCG GCGATAAAGG CCTGCGCAGC
GACACCTCGT ATCTGGTCAT CAGCAATCAC CAGTCTTGGG TCGATATCCC GGCGCTGATT
CAGGCGCTTA ACCGCCGCAC GCCGTTCTTC AAGTTTTTCC TGAAAAAGGA ACTGATCTGG
GTGCCGTTGC TGGGGCTGGC GTGGTGGGGG CTGGATTACC CATTCATGAA GCGCTACAGC
AAGGCTTTTC TGGCAAAGCA CCCGGAACTC AAAGGCAAGG ACCTGGAAAT CACCCAGGCG
GCCTGCGAAC TGTTCAAGCG CCAGCCGGTG ACCATCGTCA ACTACCTGGA AGGCACACGT
TTCACACCGG CAAAACATGC CGCCCAGGCT TCGCCATACG CCAGCCTGCT CAAGCCCAAG
GCAGGTGGCG TTGCATTTGT GCTGGCGGCA ATGGGCGAAC AACTGGACGC CATCCTGGAT
GTCACCGTGG TCTATCCTGG CTCAAGCATT CCGGGGTTCT GGGACATGCT TTGCGGGCAG
GTTGCCAAGG TGATCGTCGA CATCCAGACC CGCGAGCTGG ACCCTGCGCT GTGGCAGGGC
GATTACGAGA ACGACCCGGT GTTTCGCGAG AAAGTGCAGG CTTGGGTCAA TCAGCTCTGG
GTCGAGAAAG ATGCGCGTAT TGCGGCGTTG CGGCGTGAAT CAGCTGCCGG CACCCCATAA
 
Protein sequence
MRRLLTGCFV AILLLINTLV LIGPLLIFAL LKLLFRGRMR DRCSTGAMWV AETWAEIDKL 
IFAWCVPTQW DIRGDKGLRS DTSYLVISNH QSWVDIPALI QALNRRTPFF KFFLKKELIW
VPLLGLAWWG LDYPFMKRYS KAFLAKHPEL KGKDLEITQA ACELFKRQPV TIVNYLEGTR
FTPAKHAAQA SPYASLLKPK AGGVAFVLAA MGEQLDAILD VTVVYPGSSI PGFWDMLCGQ
VAKVIVDIQT RELDPALWQG DYENDPVFRE KVQAWVNQLW VEKDARIAAL RRESAAGTP