Gene PSPTO_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0446 
Symbol 
ID1182055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp490766 
End bp491899 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content62% 
IMG OID637391814 
Producthypothetical protein 
Protein accessionNP_790295 
Protein GI28867676 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.803856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCC AAACCGTGCG TCGCTGGTCC ATCGTGCACA CCTGGAACAG CCTGATTTGC 
ACCCTGTTTC TGTTGATGCT GGCGATCACC GGCCTGCCGC TGATCTTCCA CCATGAGATT
GATCATCTGC TGGGCGACGC GCCGCATTAC AAAGAGATGC CGGCCGACAC GCCGCATCTG
AATCTGGAGC AACTGGCCAG AGCTGCCGAA GCCCATCGGC CCGGCGAGGT CATGCAGTAT
TTCGGCTGGG ATGACGAAGA CCCCAATGGC GTGATGGCGA TCACCGCTGC CACGGCAGGC
ACCGAGCCCA ACTCATCACA CACCTTTGCC CTGGATGCGC GCACCGGCGA GGCGCTGGAA
ATGCCTTCGG CCAACGGCGG TTTCATGATG GTCATGCTGC GCCTGCACGT GGACATGTAC
GCCGAGTTGC CCGGCAAACT GCTGCTGGCC TTCATGGGGC TGCTGTTCGT GGTGGCGATT
GTTTCCGGGA CCGTGCTGTA TTCGCCGTTC ATGCGCAAGC TGGAGTTTGG CCAAGTGCGG
GTCAACAAAT CCACGCGTAC GCGCTGGCTG GACCTGCACA ATCTGATCGG CGTAGTAACG
CTGACCTGGG CGCTGGTGGT GGGCGTAACG GGAGTGATCA GTGCCTGCGC CGACCTGCTG
ATTGCTTCAT GGCGCAACGA CGCGCTGGCC AGCATGATCG CCCCTTACAA AGATGCGCCG
CCGCTGACGC AGCGAGCAGC GCCGACACGC CTGCTGGAGA TTGCCGAGTC GGCTGCGCCC
GGCATGCAAG CTGACTTCAT CGCTTTTCCC GGTACGCGTT TCTCCAGCGA GCACCACTAC
GCTGTGTTTC TCAAAGGCAA TACGCACCTG ACCGCGCACC TAGCCACACC GGTGCTGATC
GACGCACAGA CCCTGCAAGT CACCGCAGTG GTCGAGCGTC CGTGGTACAT GGATGCGCTG
GGCATGTCGC AACCGCTGCA TTTCGGTGAT TACGGCGGCA TGCCGATGAA AGTGCTCTGG
GCGGTGCTGG ATGTGCTGAC CATCATCGTG CTTGGCAGCG GGGTCTACCT GTGGTGGGTC
CGACGCCGCG TCGCCCGTTC GGTCAGCGCT GTTCAAGCGC AGGTCGCGCA ATGA
 
Protein sequence
MKSQTVRRWS IVHTWNSLIC TLFLLMLAIT GLPLIFHHEI DHLLGDAPHY KEMPADTPHL 
NLEQLARAAE AHRPGEVMQY FGWDDEDPNG VMAITAATAG TEPNSSHTFA LDARTGEALE
MPSANGGFMM VMLRLHVDMY AELPGKLLLA FMGLLFVVAI VSGTVLYSPF MRKLEFGQVR
VNKSTRTRWL DLHNLIGVVT LTWALVVGVT GVISACADLL IASWRNDALA SMIAPYKDAP
PLTQRAAPTR LLEIAESAAP GMQADFIAFP GTRFSSEHHY AVFLKGNTHL TAHLATPVLI
DAQTLQVTAV VERPWYMDAL GMSQPLHFGD YGGMPMKVLW AVLDVLTIIV LGSGVYLWWV
RRRVARSVSA VQAQVAQ