Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0446 |
Symbol | |
ID | 1182055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 490766 |
End bp | 491899 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391814 |
Product | hypothetical protein |
Protein accession | NP_790295 |
Protein GI | 28867676 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.803856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCC AAACCGTGCG TCGCTGGTCC ATCGTGCACA CCTGGAACAG CCTGATTTGC ACCCTGTTTC TGTTGATGCT GGCGATCACC GGCCTGCCGC TGATCTTCCA CCATGAGATT GATCATCTGC TGGGCGACGC GCCGCATTAC AAAGAGATGC CGGCCGACAC GCCGCATCTG AATCTGGAGC AACTGGCCAG AGCTGCCGAA GCCCATCGGC CCGGCGAGGT CATGCAGTAT TTCGGCTGGG ATGACGAAGA CCCCAATGGC GTGATGGCGA TCACCGCTGC CACGGCAGGC ACCGAGCCCA ACTCATCACA CACCTTTGCC CTGGATGCGC GCACCGGCGA GGCGCTGGAA ATGCCTTCGG CCAACGGCGG TTTCATGATG GTCATGCTGC GCCTGCACGT GGACATGTAC GCCGAGTTGC CCGGCAAACT GCTGCTGGCC TTCATGGGGC TGCTGTTCGT GGTGGCGATT GTTTCCGGGA CCGTGCTGTA TTCGCCGTTC ATGCGCAAGC TGGAGTTTGG CCAAGTGCGG GTCAACAAAT CCACGCGTAC GCGCTGGCTG GACCTGCACA ATCTGATCGG CGTAGTAACG CTGACCTGGG CGCTGGTGGT GGGCGTAACG GGAGTGATCA GTGCCTGCGC CGACCTGCTG ATTGCTTCAT GGCGCAACGA CGCGCTGGCC AGCATGATCG CCCCTTACAA AGATGCGCCG CCGCTGACGC AGCGAGCAGC GCCGACACGC CTGCTGGAGA TTGCCGAGTC GGCTGCGCCC GGCATGCAAG CTGACTTCAT CGCTTTTCCC GGTACGCGTT TCTCCAGCGA GCACCACTAC GCTGTGTTTC TCAAAGGCAA TACGCACCTG ACCGCGCACC TAGCCACACC GGTGCTGATC GACGCACAGA CCCTGCAAGT CACCGCAGTG GTCGAGCGTC CGTGGTACAT GGATGCGCTG GGCATGTCGC AACCGCTGCA TTTCGGTGAT TACGGCGGCA TGCCGATGAA AGTGCTCTGG GCGGTGCTGG ATGTGCTGAC CATCATCGTG CTTGGCAGCG GGGTCTACCT GTGGTGGGTC CGACGCCGCG TCGCCCGTTC GGTCAGCGCT GTTCAAGCGC AGGTCGCGCA ATGA
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Protein sequence | MKSQTVRRWS IVHTWNSLIC TLFLLMLAIT GLPLIFHHEI DHLLGDAPHY KEMPADTPHL NLEQLARAAE AHRPGEVMQY FGWDDEDPNG VMAITAATAG TEPNSSHTFA LDARTGEALE MPSANGGFMM VMLRLHVDMY AELPGKLLLA FMGLLFVVAI VSGTVLYSPF MRKLEFGQVR VNKSTRTRWL DLHNLIGVVT LTWALVVGVT GVISACADLL IASWRNDALA SMIAPYKDAP PLTQRAAPTR LLEIAESAAP GMQADFIAFP GTRFSSEHHY AVFLKGNTHL TAHLATPVLI DAQTLQVTAV VERPWYMDAL GMSQPLHFGD YGGMPMKVLW AVLDVLTIIV LGSGVYLWWV RRRVARSVSA VQAQVAQ
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