Gene PSPTO_0440 details

Gene Information

• Locus tag: PSPTO_0440
• Symbol: betI
• ID: 1182049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 484957
• End bp: 485550
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637391808
• Product: regulatory protein BetI
• Protein accession: NP_790289
• Protein GI: 28867670
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator
• TIGRFAM ID: [TIGR03384] transcriptional repressor BetI

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.24442
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAAGG TCGGTATGCA ACCCATCCGC CGCCAACAAC TGATCCAGGC CACGCTCACG 
GCGGTCGATC AGGTCGGTAT GGGCGATGCC AGCATTGCGC TGATCGCACG CCTGGCAGGC 
GTCTCCAACG GCATCATCAG TCACTATTTT CAGGACAAGA ACGGCCTGAT TGCCGCGACG 
ATGCGGCATC TGATGAACGC CCTGATCCAG AACGTCCGCG AACGCCGTCA GGCATTGACC 
GAAGACAGCC CCAGGGCGCA TCTGCAAGTG ATAATCGAAG GCAACTTCGA CGCCAGTCAG 
GTCAGCGGCC CGGCCATGAA AACCTGGCTG GCCTTCTGGG CGACCAGCAT GCATCACCCC 
TCGCTGCACC GATTGCAGCG TATCAACGAC CATCGTCTGT ATTCCAACCT GTGCTGCCAG 
TTCCGTCGCA CCTTGCCACT GGAACAGGCA CGCAACGCCG CCCGTGGGCT GGCAGCCCTG 
ATAGATGGGC TGTGGCTGCG AGGCGCTTTG TCAGGCGATG CATTCGACAC CGAGCAAGCG 
CAACGGATCG CTTACGAATA CATGGATTTT CAACTGGCGA AATCAGCGAG CTGA 

 

Protein sequence

MPKVGMQPIR RQQLIQATLT AVDQVGMGDA SIALIARLAG VSNGIISHYF QDKNGLIAAT 
MRHLMNALIQ NVRERRQALT EDSPRAHLQV IIEGNFDASQ VSGPAMKTWL AFWATSMHHP 
SLHRLQRIND HRLYSNLCCQ FRRTLPLEQA RNAARGLAAL IDGLWLRGAL SGDAFDTEQA 
QRIAYEYMDF QLAKSAS