Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0425 |
Symbol | |
ID | 1182034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 469321 |
End bp | 470814 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391793 |
Product | hypothetical protein |
Protein accession | NP_790274 |
Protein GI | 28867655 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC GCAATGCTCC ACGTCATGCG CTGCTCGGCC TGATCCTGGC CGGTTCGCTG GGTGCCTTGG TCGCCCAGCC GGTTCTGGCA GACGACGCCC CTGTTGCCGA GGCAACCCAG ACCACGCCCG CATTGGGCAG CAACCTGCAA ACCCTGAAAG AACTGGACGG CAAGGCCCCA GCCCGCCGCG CCTTGAAAAT CCAGACCTGG AACACCGCTG AAGGCACCAA GGTGCTGTTC GTGGAGTCTC GCGAACTACC GATGTTCGAC ATGCGCGTGA TTTTTGCCGC TGGCAGCAGT CAGGATCAAA AATCGCCCGG TATCGCCTTG CTGACCAACG CCATGCTCAA TGAAGGCGTC AAGGGCAAGG ACGTCAGCGC CATCGCCCAG GGTTTTGAAG GGCTGGGCGC AGACTTCGGC AACGGCTCCT ATCGCGACAT GGCCGTCGCA TCGTTGCGCA GCCTGAGTGC GGTCGACAAG CGCGACCCGG CCTTGAAGCT GTTCGGTGAG GTCGTGGGCA AGCCCACCTT CCCTGCCGAC TCGCTGGCGC GCCTCAAAAA CCAGCTGATC GACAGCCTGG AAAGCCAGAA GCAGAGCCCG GGTGCCATCG GCAACAAGGC GCTGTTCGAG CGTCTGTATG GCGATCATCC ATATGCTCAT CCGAGCGAAG GCAATGTAAA AAGTATCAAT GCTATTACGC TGGCTCAACT CAAGGCGTTT CACGCCAAGG CCTATGCGGC TGGCAATGCG GTGATTGCAC TGGTTGGCGA CTTGTCGCGA GACGAAGCGC AAGCCATCGC GGCGCAGGTG TCCGCCTCGC TGCCAAAAGG CCCGGCGCTG GCCAAGGTTG CCGACCCGGT CGAACCCAAG GCTGGCCCGA CGCACATCGA GTTTGCTTCC AACCAGACCC ACCTGATGCT CGCGCAACTG GGCATCGACC GCAACGATCC GGATTATGCG GCGCTGACCG TCGGTAATTC GGTATTGGGT GGCGGCGGTT TCGGCAGCCG ACTGATGACC GAAGTGCGTG AAAAACGCGG ACTGACCTAC GGTGTCTCGT CTGGCTTCAC GGCCATGCAA GTGGCCGGGC CGTTCATGAT CGGCCTGCAG ACCCGTGCGG AAATGAGCGA AAACACCCTC AAGCTGGTCC AGGACATAGT TCGCAACTTC CTCGCCAGCG GCCCGACCCA GAAAGAACTC GACGACGTGA AGCGCGAGCT GACCGGGAGC TTCCCGCTTA CCGCAGCCAG CAACTCGGCC ATCGTCGGCC AATTGGGCGC CATCGGCTTC TATGATCTGC CATTGACCTA CCTTGAGGAC TACATTGCCG CCGCCCAGAG CGTGACGGTC GAACAGGTCA AGGCTGCAAT GAGCAAGCAT CTGAGCGCCG ACAAGATGGT CATCGTCAGC GTTGGCCCGA CAGTGGAGCA AAAGCCGCTG CCCGCGCCGA CCGACAAACC CGTTCGCCAA CCTGTAGGGG TCCCGGAACA CTGA
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Protein sequence | MIKRNAPRHA LLGLILAGSL GALVAQPVLA DDAPVAEATQ TTPALGSNLQ TLKELDGKAP ARRALKIQTW NTAEGTKVLF VESRELPMFD MRVIFAAGSS QDQKSPGIAL LTNAMLNEGV KGKDVSAIAQ GFEGLGADFG NGSYRDMAVA SLRSLSAVDK RDPALKLFGE VVGKPTFPAD SLARLKNQLI DSLESQKQSP GAIGNKALFE RLYGDHPYAH PSEGNVKSIN AITLAQLKAF HAKAYAAGNA VIALVGDLSR DEAQAIAAQV SASLPKGPAL AKVADPVEPK AGPTHIEFAS NQTHLMLAQL GIDRNDPDYA ALTVGNSVLG GGGFGSRLMT EVREKRGLTY GVSSGFTAMQ VAGPFMIGLQ TRAEMSENTL KLVQDIVRNF LASGPTQKEL DDVKRELTGS FPLTAASNSA IVGQLGAIGF YDLPLTYLED YIAAAQSVTV EQVKAAMSKH LSADKMVIVS VGPTVEQKPL PAPTDKPVRQ PVGVPEH
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