| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0407 |
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| Symbol | |
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| ID | 1182016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 452492 |
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| End bp | 453880 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391775 |
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| Product | drug resistance transporter, EmrB/QacA family |
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| Protein accession | NP_790256 |
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| Protein GI | 28867637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAA AGACCCTGCG CTGGATGCCT TGGGTCATCG CCATTGCGTT CTTCATGCAA
AGCCTGGACG GCACGATTCT CAATACCGCC CTGCCGTCCA TGGCCCGCTC TCTGGCAGAA
GATCCGCTGC GCATGCAGTC GGTGGTCATC GCCTACATGC TGACGATCGC GCTGCTGATC
CCGGCCTCGG GCTGGATTGC CGATCGCTTC GGGATCAAAC GCATCTTTTT CAGCGCCATT
TTGCTCTTCA GTTTCGGATC GCTGCTGTGC GCGCTGTCCA ACTCGCTGAC CATGCTGGTC
GCGGCGCGGA TTATCCAAGG GCTCGGCGGT GCACTGATGG TGCCTATCGG GCGGCTGATT
GTGCTGCGCG CCTACCCGCG ATCAGAGCTG GTGCGGATCA TGGGCTTCAT CACCATACCC
GGCTTGCTCG GCCCTTTATT GGGTCCGACG CTGGGCGGGT GGATGGTCGA ATACCTGAGC
TGGCACTGGA TTTTCCTGAT CAACATTCCG GTCGGGCTCT TGGGCTGTTA CGCGGTCAAG
CACTTCATCC CTGATCTGCC CGGCGGTGGC CGAACGCATT TCGACGGAAT CGGCTTCATT
CTGTTTGGCG CAGCGATGGT GCTGATCACC ATTGCGCTGG AAGGCCTGGG CGAACTGCAC
CTGCCGCACA TGCGCGTGGT GCTGCTGCTG TTTGCCGGGA TGGGCTGCCT GGCGGCCTAC
TGGCTGCGGG CCGGGCACAT CGAGTCGCCG CTGTTCGCAC CCTCGCTGTT TCGCACCCGC
ACGTTTGCGG TGGGCATCAT GGGCAACCTG TTCGCGCGGC TGGGCAGCGG TGCCCTGCCC
TTTCTGGTGC CTTTGCTGCT GCAGGTCGCG CTGGGGTATT CGCCCTCGCA GGCCGGCATG
AGCATGTTGC CGCTGGCGGC GGCGGGTATG TTCGCCAAGA CCGTGGCGCG CTGGTTGATC
GAACACTTGG GTTATCGGGT CATCCTGACC AGCAACACAT TGCTGCTCGG CATTCTGTTG
GCCAGCCTGG CGCTGGTGGA CGGGCAGACG CCGTACTGGA TTCTGCTGAT CCACCTGGGG
CTGCTCGGCG CGGTGAATTC CTTGCAGTTC ACGGCGATGA ACACCGTGAC CCTGATCGAC
CTGGACGACG CCAGCGCCGC GAGTGGCAAC AGCCTGCTCT CGGTGGTGGC ACAGTTGTCG
CTGAGCCTTG GGGTTGCCAG CGCTGCGGCC TTGTTGGGCG GCTTCAGTGA GGAGGTGACC
AGCGGCGAGG TCAGCAGTGT GCTGGGTGCG TTCCAGCTGA CCTTCCTGAG CGTCGGAGTC
TTGGCCATGT TCGCAGCCGG GATCTTCCTG CAATTGCCGC CCAAAGAGGT AAAGGCGGCG
AAGGCCTGA
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| Protein sequence | MDEKTLRWMP WVIAIAFFMQ SLDGTILNTA LPSMARSLAE DPLRMQSVVI AYMLTIALLI
PASGWIADRF GIKRIFFSAI LLFSFGSLLC ALSNSLTMLV AARIIQGLGG ALMVPIGRLI
VLRAYPRSEL VRIMGFITIP GLLGPLLGPT LGGWMVEYLS WHWIFLINIP VGLLGCYAVK
HFIPDLPGGG RTHFDGIGFI LFGAAMVLIT IALEGLGELH LPHMRVVLLL FAGMGCLAAY
WLRAGHIESP LFAPSLFRTR TFAVGIMGNL FARLGSGALP FLVPLLLQVA LGYSPSQAGM
SMLPLAAAGM FAKTVARWLI EHLGYRVILT SNTLLLGILL ASLALVDGQT PYWILLIHLG
LLGAVNSLQF TAMNTVTLID LDDASAASGN SLLSVVAQLS LSLGVASAAA LLGGFSEEVT
SGEVSSVLGA FQLTFLSVGV LAMFAAGIFL QLPPKEVKAA KA
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