Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0397 |
Symbol | |
ID | 1182006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 437235 |
End bp | 439244 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391765 |
Product | iron-sulfur cluster-binding protein |
Protein accession | NP_790246 |
Protein GI | 28867627 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.138484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCTTA AAGCCCGCAC CTTAAAGCTC GCACCTGAGG TCAACGTGAT GCTAGACACC CTTCTCCCCA TCCTGCTGTT CAGCGCCCTG GCCCTCGCGG CGCTGGGTGC CTGGCGGCGG GTGAATATGT GGCGCATGGG CCGTGCTTCC AGAGTCGATC TGCTCGGCGG GCTGTTGGCC ATGCCCAAGC GCTACATGGT CGATCTGCAC CACGTGGTTG CCCGTGACAA ATACATCGCC AACACGCATG TGGCGACGGC AGGCGGCGCG GTCGCCTCGG TTGTGCTGGC GATTCTGGTG CATGGTTTCG GTCTGCATAA CCGTGTGCTG GGCTACGCGC TATTGCTGAT GACCGCAGTG ATGTTCGTCG GCGCAGTGTT TGTCTATCGC CGTCGCCTCA ACCCGCCTGC GCGTTTGTCC AAAGGACCGT GGATGCGCCT GCCGAAAAGC CTGATGGCGT TTTCCGCGAG CTTCTTTCTG GTCACGTTGC CGGTGGCCGG TATTCTTCCC GAACACTTCG GTGGCTGGGT GCTGGTCGCC ATTCTCGGGT TGGGTGTGTT GTGGGGCGTG AGCGAGCTGT TCTTCGGCAT GACCTGGGGC GGCCCGATGA AGCACGCTTT CGCCGGGGCC TTGCACCTGG CCTGGCATCG CCGTGCCGAG CGTTTTGGCG GTGGACGTTC CACCGGGTTG AAACCGCTTG ATCTGAATGA TCGGACTGCA CCGCTGGGTG TCGAGAAGCC CGCAGACTTC ACCTGGAACC AGTTGCTGGG TTTCGACGCC TGCGTGCAGT GCGGCAAATG TGAAGCAGCG TGCCCGGCGT TCGCGGCGGG TCAGCCGCTG AACCCCAAGA AGCTGATCCA GGACATGGTC GTCGGCCTTG CCGGCGGCAC CGACGCAAAA TTTGCCGGCA GCCCGTACCC ATCGCTTGAT GGCAAAGGCA AGCCACTGGG CGAGCATGGC GGCAACCCGC ATCAGCCCAT CGTCAACGGT CTGGTGGATG CCGAGACGCT GTGGTCCTGC ACCACCTGCC GCGCGTGTGT CGAAGAGTGC CCGATGATGA TCGAGCACGT TGATGCCATC GTCGACATGC GCCGCTACCT GACCCTGGAA AAAGGCGCAA CGCCGAACAA AGGCGCGCAA GTGCTGGATA ACCTGATCGC CACCGACAAC CCCGGCGGCT TCGCACCGGG CGGACGAATG AACTGGGCCG CCGACCTGAA CCTTGATCTG CTCAGCGTGA GGAAGACAGT AGACGTGCTG TTCTGGGTTG GCGATGGCGC GTTTGACATG CGCAATCAAC GCACGCTGCG TGCGTTCGTC AAAGTCCTCA AGGCGGCCAG GGTGGATTTC GCCGTGCTGG GCCTTGAAGA GCGCGACAGC GGTGACGTGG CTCGGCGTCT GGGCGATGAG GCGACTTTTC AGACGCTCGC CCGCCGCAAC ATTCAGACCC TGGCCCAGTA CCACTTCAAA CGCATCGTGA CCTGCGACCC GCACAGCTTT CATGTGCTGA AAAACGAATA CGGCGCATTG GGCGGTGACT ATCAGGTGCA GCATCACAGC ACCTTCATGG CCGAACTGGT ACAGCGCGGC ACCCTGAATC TGAGCCAGCA CAAAGGCGCC AGCGTCACCT ATCACGACCC GTGTTACCTG GGCCGCTACA ACGGCGAATA CGAAGCACCG CGTGAAGTGC TGCGCGCGCT GGGTATCGAA GTCAGGGAGA TGCAGCGCTC CGGCTTTCGT TCTCGCTGCT GCGGTGGTGG GGGCGGCGCA CCGATTACGG ACATCCCCGG CAAACAGCGG ATTCCCGACA TGCGTATGGA CGACATTCGT CAAACCGCTG CCGAGGTGGT GGCGGTGGGT TGTCCACAAT GCACGGCCAT GCTTGAAGGT GTGGTTGAAC CGCGCCCGCT GATCAAGGAT ATCGCCGAGC TGGTGGCTGA TGCGCTGGTT GAAGAAGTTA TCCCCAGCCC GTCTGTTGCC GCCAAACGTG AACCCGCGGA GGTGCACTGA
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Protein sequence | MQLKARTLKL APEVNVMLDT LLPILLFSAL ALAALGAWRR VNMWRMGRAS RVDLLGGLLA MPKRYMVDLH HVVARDKYIA NTHVATAGGA VASVVLAILV HGFGLHNRVL GYALLLMTAV MFVGAVFVYR RRLNPPARLS KGPWMRLPKS LMAFSASFFL VTLPVAGILP EHFGGWVLVA ILGLGVLWGV SELFFGMTWG GPMKHAFAGA LHLAWHRRAE RFGGGRSTGL KPLDLNDRTA PLGVEKPADF TWNQLLGFDA CVQCGKCEAA CPAFAAGQPL NPKKLIQDMV VGLAGGTDAK FAGSPYPSLD GKGKPLGEHG GNPHQPIVNG LVDAETLWSC TTCRACVEEC PMMIEHVDAI VDMRRYLTLE KGATPNKGAQ VLDNLIATDN PGGFAPGGRM NWAADLNLDL LSVRKTVDVL FWVGDGAFDM RNQRTLRAFV KVLKAARVDF AVLGLEERDS GDVARRLGDE ATFQTLARRN IQTLAQYHFK RIVTCDPHSF HVLKNEYGAL GGDYQVQHHS TFMAELVQRG TLNLSQHKGA SVTYHDPCYL GRYNGEYEAP REVLRALGIE VREMQRSGFR SRCCGGGGGA PITDIPGKQR IPDMRMDDIR QTAAEVVAVG CPQCTAMLEG VVEPRPLIKD IAELVADALV EEVIPSPSVA AKREPAEVH
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