| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0360 |
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| Symbol | thiI |
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| ID | 1181969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 392832 |
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| End bp | 394286 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637391728 |
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| Product | thiamin biosynthesis protein ThiI |
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| Protein accession | NP_790209 |
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| Protein GI | 28867590 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAA TCGTTAAAGT TTTCCCAGAA ATCACCATCA AAAGCCCGCC GGTGCGCAAG
AAATTCATCC GGCAGCTGGG CAAGAACATT CGTACCGTGC TCCGTGAACT GGACGCGGAC
ATTGTCGTGG GTGGCGTATG GGACAACCTT GAGGTCGAAA CCCGTCTGAC CGACCCCAAA
GTGCTGCAGG GCATAAGGGA CCGGCTTAGC TGCATGCCGG GGATTGCCAA CTTTCTGCAG
GTGGCCGAGT ACCCGCTGGG CGACATGGAT GACGTGGTCG CCAAGTGCAA ACTGCACTAC
GCCGATCTGT TGCCGGGCAC GATGTTTTCA GTGCGCTGCA AACGCGCCGG TCGTCACGAT
TTCAGCTCGA TGGACGTCGA AAAATACGTC GGCAGCCAGT TGCGCATGCA ATGCGGCGCG
GCCGGGATCG AGCTGAAAAA GCCCGATCTG GTCGTGCGGA TGGAAATTCG CGACCAACGG
TTGTTTGTTG TTCATGACCA GCACAAGGGC ATGGGCGGCT ATCCTTTGGG CGCGCTGGAG
CAGACCCTGG TATTGATGTC CGGCGGGTTC GATTCGACCG TTGCGGCCTA CCAGATCATG
CGCCGCGGCC TTATGGCGCA CTTCTGCTTC TTCAATCTGG GCGGTCGTGC CCATGAACTG
GGCGTGATGG AAGTCGCGCA TTTCATCTGG AAGAAGTACG GCAGTTCGCA GCGTGTGCTG
TTTGTCAGCG TGCCTTTCGA GGAAGTTCTC GGAGAAATTC TGCAGAAAGT CGATAACAGT
CATATGGGTG TAGTTTTGAA GCGTATGATG TTACGCGCTG CATCCGCTGT GGCTGATCGT
CTCGAAATCG ACGTGCTGGT GACGGGCGAA GCGATTTCAC AGGTTGCCAG CCAGACACTG
CCGAACCTGT CGCTGATCGA CGCGGCCACC GACAAACTGG TGTTGCGACC GCTGGTTGCA
ACCCACAAGC AGGACATCGT GGACCTGGCG ACTGAAATCG GCACTGCCGA TTTTGCCCGG
CACATGCCCG AGTATTGCGG GGTGATTTCG GTCAACCCGA AGACCAACGC CAAGCGAAAT
CGCGTTGAGT ACGAAGAACA ACAGTTCGAC ATGGCGATTC TCGAGCAGGC GCTCGAGCGC
GCCAAGCTGG TTTCGATCGA TCGGGTCATC GACGATCTGA GCCGCAATAT CGACATCGAA
GAAGTCAGCC AGGCGCTGGC CGGCCAGGTC ATCATCGACA TCCGTCACCC GGATGCCCAG
GAAGACCAGC CGCTGCAAGT GCCCGGCGTG GAGATACAGA CGTTGCCGTT CTACGCACTG
AACAGCCGTT TCAAGGCACT GGATGACACG CGCCAGTACC TTTTGTATTG CGACAAAGGC
GTCATGAGTC GCCTGCATGC TCACCATTTG CTCAGTGAGG GGCATGCCAA TGTGCGCGTT
TATCGACCGA GCTAA
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| Protein sequence | MKLIVKVFPE ITIKSPPVRK KFIRQLGKNI RTVLRELDAD IVVGGVWDNL EVETRLTDPK
VLQGIRDRLS CMPGIANFLQ VAEYPLGDMD DVVAKCKLHY ADLLPGTMFS VRCKRAGRHD
FSSMDVEKYV GSQLRMQCGA AGIELKKPDL VVRMEIRDQR LFVVHDQHKG MGGYPLGALE
QTLVLMSGGF DSTVAAYQIM RRGLMAHFCF FNLGGRAHEL GVMEVAHFIW KKYGSSQRVL
FVSVPFEEVL GEILQKVDNS HMGVVLKRMM LRAASAVADR LEIDVLVTGE AISQVASQTL
PNLSLIDAAT DKLVLRPLVA THKQDIVDLA TEIGTADFAR HMPEYCGVIS VNPKTNAKRN
RVEYEEQQFD MAILEQALER AKLVSIDRVI DDLSRNIDIE EVSQALAGQV IIDIRHPDAQ
EDQPLQVPGV EIQTLPFYAL NSRFKALDDT RQYLLYCDKG VMSRLHAHHL LSEGHANVRV
YRPS
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