Gene PSPTO_0343 details

Gene Information

• Locus tag: PSPTO_0343
• Symbol: engB
• ID: 1181952
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 372362
• End bp: 372997
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637391712
• Product: GTP-binding protein EngB
• Protein accession: NP_790193
• Protein GI: 28867574
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTCA AAAACCCCAT TCTCGGTCTG TGCCAACAGG CCACGTTCAT GCTCAGCGCC 
GCCAAGGTCG ACCAATGCCC CGATGACGAA GGTTTTGAAG TCGCATTCGC CGGGCGCTCC 
AACGCGGGCA AGTCGAGCGC GCTGAACACC CTGACTCACG CCAGCCTTGC GCGCACCTCC 
AAGACTCCTG GGCGCACCCA GTTGCTGAAC TTTTTCGGCC TTGATGAAGA TCGTCGTCTG 
GTCGACTTGC CCGGCTATGG CTACGCCAAA GTGCCAATCC CGCTGAAACT GCATTGGCAG 
CGCCACCTGG AAGCTTATCT GGGCAGCCGC GAAAGCCTGA AAGGGCTGAT CCTGATGATG 
GACATCCGTC ATCCAATGAC CGACTTCGAC CTGCTGATGC TCGATTGGGC GATTGCCAGC 
CACATGCCAA TGCACATCCT GCTGACCAAA GCTGACAAGC TGACCTACGG CGCTGCCAAG 
AACACGCTGC TCAAGGTTCA GGCCGAGATT CGCAAAGGCT GGGGTGACGC AGTGAGCATC 
CAGTTGTTTT CGGCGCCCAA ACGCATGGGG CTGGAAGAGG CCTACACAGT GCTGGCCGGC 
TGGATGGAGC TGGAAGACAA AGCGCCTGCG GAGTAA 

 

Protein sequence

MQLKNPILGL CQQATFMLSA AKVDQCPDDE GFEVAFAGRS NAGKSSALNT LTHASLARTS 
KTPGRTQLLN FFGLDEDRRL VDLPGYGYAK VPIPLKLHWQ RHLEAYLGSR ESLKGLILMM 
DIRHPMTDFD LLMLDWAIAS HMPMHILLTK ADKLTYGAAK NTLLKVQAEI RKGWGDAVSI 
QLFSAPKRMG LEEAYTVLAG WMELEDKAPA E