| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0328 |
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| Symbol | ompR |
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| ID | 1181937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 358877 |
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| End bp | 359617 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391697 |
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| Product | DNA-binding response regulator OmpR |
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| Protein accession | NP_790178 |
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| Protein GI | 28867559 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGCA CCGCACAAAA TGCTGAAGGC GAAAAAATCC TTATTGTCGA TGACGATCCG
GGGCTGAGCA GCCTTCTGGA ACGTTTTTTC TCCAGCAAGG GCTACCGTGC CCGCGCCGTG
GCAAACGTGG AACAAATGGA CCGCTTGCTG GCCCGTGAGG TTTTCAACCT TGTGGTGCTG
GACTTGATGC TGCCCGGAGA AGACGGCCTT TCAGCCTGCC GTCGTCTGCG TGCCGCGAAC
AATCAGGTAC CCATCATCAT GCTGACCGCC AAGGGCGATG AGCTGAGCCG CATCAAGGGG
CTCGAACTGG GCGCTGACGA CTACCTGGCC AAGCCGTTCA ACCCGGACGA GCTGATGGCG
CGGGTCAAGG CTGTTCTGCG TCGTCAGGCA GCACCTGTGC CAGGCGCGCC CGGCAGTGAA
GACGAGTCGG TCAGCTTCGG CGACTACGTG CTCTCCCTGG CGACCCGCGA ACTGAAACGC
GGTGAAGAAG TACACATGCT GACCACGGGT GAATTCGCGG TCCTCAAGGC TTTGGTAATG
CACGCTCGCG AGCCGCTGAC CCGCGACAAA CTGATGAATC TGGCCCGTGG CCGGGAGTGG
GATGCGCTGG AGCGGTCCAT CGACGTACAG ATTTCCCGTC TGCGTCGCCT GATCGAACCG
GATCCTTCCA AGCCGCGTTA TATCCAGACA GTCTGGGGCG TAGGTTATGT ATTCGTTCCG
GATGGTGCCG GAAGCCGCTG A
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| Protein sequence | MSSTAQNAEG EKILIVDDDP GLSSLLERFF SSKGYRARAV ANVEQMDRLL AREVFNLVVL
DLMLPGEDGL SACRRLRAAN NQVPIIMLTA KGDELSRIKG LELGADDYLA KPFNPDELMA
RVKAVLRRQA APVPGAPGSE DESVSFGDYV LSLATRELKR GEEVHMLTTG EFAVLKALVM
HAREPLTRDK LMNLARGREW DALERSIDVQ ISRLRRLIEP DPSKPRYIQT VWGVGYVFVP
DGAGSR
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