| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0317 |
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| Symbol | gcvH-1 |
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| ID | 1181926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 344962 |
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| End bp | 345348 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391686 |
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| Product | glycine cleavage system H protein |
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| Protein accession | NP_790167 |
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| Protein GI | 28867548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATA TTCCCGCCGA GCTGCGTTTC GCCGAAAGTC ATGAATGGGC ACGCCTGGAG
GCTGATGGCA CCGTGACCGT TGGCATCTCG GACCATGCAC AGGAAGCGCT GGGCGATGTG
GTCTTCGTCG AACTGCCGGA AATCGGCAAG GTGTTCGCTG CCGGTGATGT GGCTGGCGTT
GTCGAGTCGG TGAAGGCGGC CTCGGACATC TACTCGCCAG TGGCCGGTGA AGTTGTCGAG
GTCAATGAGG CGCTGGGCGA TTCGCCCGAG TCGCTCAACA GCGAGCCGTA CAGCGCCTGG
ATCTTCAAGG TCAAGCCAGC CAGTGCAGAG GCTGATCTGG CCAAACTGCT GGACGCTGCA
GGCTACAAAG GCGCCATCGG CGAGTAA
|
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| Protein sequence | MSNIPAELRF AESHEWARLE ADGTVTVGIS DHAQEALGDV VFVELPEIGK VFAAGDVAGV
VESVKAASDI YSPVAGEVVE VNEALGDSPE SLNSEPYSAW IFKVKPASAE ADLAKLLDAA
GYKGAIGE
|
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