| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0316 |
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| Symbol | gcvT-1 |
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| ID | 1181925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 343836 |
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| End bp | 344918 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391685 |
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| Product | glycine cleavage system T protein |
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| Protein accession | NP_790166 |
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| Protein GI | 28867547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGC GTACCCCCCT GTTCGACCTG CACCTCGCCC TTGGCGCGAA AATGGTCGAT
TTTGGTGGCT GGGACATGCC GTTGCATTAT GGATCGCAGG TTGAGGAGCA CCACCAGGTG
CGCCGCGACT GTGGGGTCTT CGACGTCTCC CACATGAACG TCATTGATGT GCTCGGCCGT
GAGGCCAAAG CCTGGCTGCG CCGGTTGCTG GCCAACGACG TCGACAAGCT CAAGACCCCT
GGTCGCGCCC TGTACAGCGC CATGCTGGAT GAGCAGGCCG GTGTCATTGA TGACATGATC
GTCTACCTCA CCGCCGATGG TTACCGGCTG GTCGTCAACG CCGCGACCGG TGCCAAGGAC
CTTGCCTGGA TGCAGTCGCA GTTGGGCGAT TTCGATGTGC AGTTGCTCGC ACGCAGCGAA
ATGGCGATGC TGGCAATTCA AGGGCCACAG GCCAGAAACC GGATTGCCCA GCTGGTTTCC
AGCGCTCGCG CAGAACTGAT CCGCCAGCTT AAGCCGTTTG AAGGCCTCGA TGATGGCGAC
TGGTTCATTG CGCGCACCGG TTACACCGGC GAAGACGGTC TGGAAATCAT GCTGCCTGCC
GACGAAGCCC AGCGTTTTTT CAATGAACTG GTTGGCGCGG GTATTTCGCC CATCGGTCTG
GGCGCGCGTG ACACGCTGCG CCTTGAGGCA GGCATGAACC TCTACGGTCA GGACATCGGC
GAACATGTTT CGCCGCTGGC CTCGAATATG GCCTGGAGCA TCGCCTGGGA GCCTGCCGAG
CGTGATTTCA TCGGCCGTCA GGCGCTGGAA AGCGAACGGG CTGAAGGAAC CGCCTTCAAA
CTCGTAGGAT TGGTGCTCGA AGAGCGCGGC GTTTTACGGG CGCATCAGGT GGTACGTGTC
GCAGAAATTG GCGAAGGAGA GATCACCAGT GGTAGTTTCT CTCCTACGTT GAGCAAATCC
ATTGCACTGG CTCGCGTTCC GATGGCGACT GCCGACCGGG CCGAGGTGGA AATCCGCGGC
AAATGGTACC CGGTGCGGGT GGTGCAGCCT GCGTTCGTGC GCCATGGCAA AACCTTGATC
TAA
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| Protein sequence | MGQRTPLFDL HLALGAKMVD FGGWDMPLHY GSQVEEHHQV RRDCGVFDVS HMNVIDVLGR
EAKAWLRRLL ANDVDKLKTP GRALYSAMLD EQAGVIDDMI VYLTADGYRL VVNAATGAKD
LAWMQSQLGD FDVQLLARSE MAMLAIQGPQ ARNRIAQLVS SARAELIRQL KPFEGLDDGD
WFIARTGYTG EDGLEIMLPA DEAQRFFNEL VGAGISPIGL GARDTLRLEA GMNLYGQDIG
EHVSPLASNM AWSIAWEPAE RDFIGRQALE SERAEGTAFK LVGLVLEERG VLRAHQVVRV
AEIGEGEITS GSFSPTLSKS IALARVPMAT ADRAEVEIRG KWYPVRVVQP AFVRHGKTLI
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