| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0271 |
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| Symbol | |
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| ID | 1181879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 296849 |
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| End bp | 297670 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637391640 |
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| Product | tonB protein, putative |
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| Protein accession | NP_790122 |
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| Protein GI | 28867503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATG CGGTAATAAT GAAAGCAGTG CCCGGCCCAT CGCCCGATAT AACACCTACG
GCGTGGCAGG GCATTCCTTT CACGGCCAAT ACGTCACGCC CGGGCGGCCT TAACAAGCCG
CAAGTCATGG TATTGATTGC TGCGTCGGTA CTTATTCACG GTGTGATCTG GTGGTACATG
CAAACGGCGC AGCCAGCACT GCCCGAAGTT GCACCACAGG TTCCGGAAAT GACCATTGAA
CTGACCAGCC CGACACCGCC GGCGCCGGAA CCGCCGCCAC CCGAGCCACC ACCTCCGCCT
CCCCCGCCGC CGCCACCCGA ACCGGAACAA CCGGTCGAGG ATCCGGACGC CGTGGAGCCG
CCGCCCAAGC CGATCGAAAA GCCGAAGGTC GAGAAGCCCA AGCCGGTCAA GAAGCCTGAA
CCGGTGAAAA AGCCGACGCC GCCCGCGCCA ACGCCTGCTG CCGCACCGAG CCCGCCTGCG
CCGCCAACAC CTGCGCCCGC GCCTGCTGCC CCTGCTGCGC CGCCTGCACC GGCCAAGGAA
AGTGCGGCTG TTTCCGGGCT CGCCAGCCTG GGCAATCCGC CACCGGAGTA TCCGGGGCTG
GCCTTGCGCC GCAGTTGGGA AGGTCGCGTG ATTCTGCGCA TCAAGGTGCT GCCCAACGGC
CGCGCTGGTT CGGTCGAGGT GACCAAATCC AGCGGCAAAC CGGCACTAGA CGATGCCGCC
GTGGAGGCCG TGCGCAACTG GAAGTTTATC CCGGCCAAAC GTGGCGATAC GCCGATAGAA
GGCTTCGCGA CGCAGACCAT CGACTTCAAG CTGCCGGAAT GA
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| Protein sequence | MNDAVIMKAV PGPSPDITPT AWQGIPFTAN TSRPGGLNKP QVMVLIAASV LIHGVIWWYM
QTAQPALPEV APQVPEMTIE LTSPTPPAPE PPPPEPPPPP PPPPPPEPEQ PVEDPDAVEP
PPKPIEKPKV EKPKPVKKPE PVKKPTPPAP TPAAAPSPPA PPTPAPAPAA PAAPPAPAKE
SAAVSGLASL GNPPPEYPGL ALRRSWEGRV ILRIKVLPNG RAGSVEVTKS SGKPALDDAA
VEAVRNWKFI PAKRGDTPIE GFATQTIDFK LPE
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