Gene PSPTO_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0223 
Symbol 
ID1181831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp244822 
End bp245556 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637391592 
Producthypothetical protein 
Protein accessionNP_790074 
Protein GI28867455 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.282298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC AGCCTCCCGC TTCAACCGGC ACCCCCAGCG AATCGCCTGT CGATAGCGCA 
GCGCCAGACC TTGAAGCAGA AGCGGTCATC GCTTTCCTGC TTGAGCATCC TCAATTCTTC
GCCGAGCATG ACGAGCTGCT GGTGTCGATG CGCATTCCTC ACCAGCGTGG CGACACCGTC
TCGCTGGTCG AGCGTCAGCT CAATCTGCTG CGCGAGCGCA ACATCGAAAT GCGCCATCGC
CTCTCACAAC TGATGGACGT GGCACGCGAC AACGACCGTC TGTTCGAGAA AACCCGTCGC
CTGAACCTCG CGCTGATGGA CGCCACCAGC CTGGACGAGC TGGTGATCGC CGTGGAAGAC
AGCCTGCGCC AGGATTTTCA GGTGCCTTTC GTCAGCCTGA TTCTATTCAG CGACAGCCCG
ATGCCAGTGG GCCGCTGGGT CAGCAGTGCC GAGGCACAGA AAGCCATCGG CGGTCTGATT
GGCGAGAAGA TCATCTGCGG CGCGCTGCGT GAGCATGAGC TGGCATTTCT GTTCGGTGCC
GAGCAAGGCA AGGAAGTCGG TTCGACCGCC ATCGCCAGCC TTAACCATCT GGGCCTGCAT
GGCGTGCTGG CCATCGGCAG CCGTGACCCA CAGCATTACA AAAGCTCGGT CGGCACGCTG
TTCCTCAGTT ATATCGCTGA CGTACTGAGC CGTCTGCTGC CCCGCTTCGC CCATTCGCTG
CGTTCGGTCC GCTAG
 
Protein sequence
MTDQPPASTG TPSESPVDSA APDLEAEAVI AFLLEHPQFF AEHDELLVSM RIPHQRGDTV 
SLVERQLNLL RERNIEMRHR LSQLMDVARD NDRLFEKTRR LNLALMDATS LDELVIAVED
SLRQDFQVPF VSLILFSDSP MPVGRWVSSA EAQKAIGGLI GEKIICGALR EHELAFLFGA
EQGKEVGSTA IASLNHLGLH GVLAIGSRDP QHYKSSVGTL FLSYIADVLS RLLPRFAHSL
RSVR