Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0205 |
Symbol | |
ID | 1181813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 231080 |
End bp | 232075 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637391575 |
Product | hypothetical protein |
Protein accession | NP_790057 |
Protein GI | 28867438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.078736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTT TAATGGCAGC CATCTGTATT ACGTGGTCTG GATTTTCCTT TCTTTTTTAT CGAGGGCTCT ATCACCGGCG TGTTCGTCAC GCTGCGTATG CCGAGTTTGC ACGTGCCACG TTCACTGCAG TGCAAGCGCA TTTCCCAGAG TTGAAATCAA AAAGCTCGAG CCTTGTTATC GACAAAGGCT TTGGGGTTAA AAATGACGAA GCTTGGCAAG AGGCGCTTCA TACTTTCATC TCCCATCGAG TCGTTCCTGA GCTGAGCCCC AGAATCAGAG AGTCTTTAAA GGCTTCACCG AGTGCGAACA AGGATTTCTC TACGTTGACT GTCAACTTAG TGCTCACATT GGTCGAGTAT CAGAGCATGC CTGAGACCTA CAACCTCACC GAAGCTATCG CCTTGATTGA GGAGCCCGAG GATCCATTTG CATTTCTATC CGGAACTCCA AAATTCAAGC CGCAGAAAGA GGTATTGACC CGCTTAGCGG TTGTTGTATT GGCAGTCGGA ATTATAGGAG AGACCTCACC TTCTAATGCA GCCGGTGGAG AAGCTTTTTC TCCTCTATCG GCCTGCAGCG CGCTTGCCGA TATTGACGGT TTTCAGCCAA ACAAAAGCGG CTACATTGAG CTTTACGATG GCATTTTTTC TTGCGCTACA CCTTACAAGG AATTGGGAAA CCAAGCATTA CCTAACAACA TCGCTTTGTA TGGCAGAGGG AATGCAAGCG AAGTCACCCG TGTAAAGTTG ATGCTTAACG TCAATGTTTC CTCACGTGGA GCCCAAGACG CCATGCTTTT GGCAAGCCTC TGCACGCAGA TGATAACCAA CGTCACGGGG AATCCGGCTT CCGGTTTTGA ACACAAAATA GCTCAGGGCA AGCCTTTCAA GCAGTCTTTT CACGGCTATA GCGTGTACCT AGATAGGACC TTATGGGGAA CAGGGAAAGG TTACGAGCTT AACTGCGGTA TTGCTACGCT GAATAACAAG GAGTAA
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Protein sequence | MNALMAAICI TWSGFSFLFY RGLYHRRVRH AAYAEFARAT FTAVQAHFPE LKSKSSSLVI DKGFGVKNDE AWQEALHTFI SHRVVPELSP RIRESLKASP SANKDFSTLT VNLVLTLVEY QSMPETYNLT EAIALIEEPE DPFAFLSGTP KFKPQKEVLT RLAVVVLAVG IIGETSPSNA AGGEAFSPLS ACSALADIDG FQPNKSGYIE LYDGIFSCAT PYKELGNQAL PNNIALYGRG NASEVTRVKL MLNVNVSSRG AQDAMLLASL CTQMITNVTG NPASGFEHKI AQGKPFKQSF HGYSVYLDRT LWGTGKGYEL NCGIATLNNK E
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