Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0187 |
Symbol | |
ID | 1181795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 210455 |
End bp | 211225 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391564 |
Product | hdtS protein |
Protein accession | NP_790046 |
Protein GI | 28867427 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATCA TGCAGGCAAT CAGGACCTTC ATCTTTTACC TGTTGCTGGG CACCAGCTCG CTGCTGTGGT GCACCTTGAG CTTTTTCATT GCGCCGTTTC TGCCGTTCAA GGCCCGCTAT CGCTTCATCA ATGTCTACTG GTGCCGTTGC GCACTGTGGC TGACCCGGGT GTTCCTCAAC ATCAAGGTCG AAGTAAGCGG CGCAGACAAC GTTCCGAAAA CGCCGTGCGT GATCATCTCC AACCATCAAA GCACGTGGGA AACCTTCTTT CTGTCGGCGT ATTTCGAGCC ACTGAGCCAG GTCCTCAAGC GTGAGTTGCT GTACGTGCCC TTCTTCGGCT GGGCGATGGC CATGCTGCGC CCCATCGCCA TCGACCGTGA TAACCCGAAG GCTGCACTCA GGGAAATCGC CAAGAAGGGC GACGAACTGC TCAAGGACGG CGTCTGGGTG CTGATCTTCC CGGAAGGCAC GCGTGTGCCT TACGGCCAGG TTGGCAAGTT CTCGCGTGGC GGCACGGCAC TTGCGGTCAA CGCCGACCTT CCGGTTCTGC CTATTGCTCA CAACGCAGGC AAATACTGGC CTCGCGATGG CTGGGGGAAG AAGCCAGGCA CTATTCAGGT AGTCATCGGC GAACCGATGT ACGCCGAAGG CACCGGCCCC CGCGCCATCG CAGCGTTGAA CGAGCGCGTT CAGACCTGGA ATGAGGATAC TCAACGCGCA TTGGGCTCAC CGGTTGCACC GGCGACAAGC ACCGAAAAGG TCCCGGCGTG A
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Protein sequence | MSIMQAIRTF IFYLLLGTSS LLWCTLSFFI APFLPFKARY RFINVYWCRC ALWLTRVFLN IKVEVSGADN VPKTPCVIIS NHQSTWETFF LSAYFEPLSQ VLKRELLYVP FFGWAMAMLR PIAIDRDNPK AALREIAKKG DELLKDGVWV LIFPEGTRVP YGQVGKFSRG GTALAVNADL PVLPIAHNAG KYWPRDGWGK KPGTIQVVIG EPMYAEGTGP RAIAALNERV QTWNEDTQRA LGSPVAPATS TEKVPA
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