Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0163 |
Symbol | |
ID | 1181771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 182751 |
End bp | 183083 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637391540 |
Product | hypothetical protein |
Protein accession | NP_790022 |
Protein GI | 28867403 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3805] Aromatic ring-cleaving dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.233913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA TCCACGGCTA CCACGCCCAC ATCTATTTCA ACGCCCAAAC TCTGGACCAG GCCCGAGCCC TGTGCGAGGC CGCGACCGAG AAATTTGCCG TGCAGATGGG GCGCGTCCAT CAGAAGCTGG TCGGGCCGCA TCCGGACTGG AGTTGCCAGT TGGCGTTCGG GCATGAACAG TTGGCTGACG TTACGCTGTG GCTTGCGTTG AATCGCGATG GGCTGGTGGT GTTTCTGCAT CCGTTGACGG GCGATGAGCT GCGTGACCAT ACCGATCATG CCATCTGGAT GGGTGCGGTC AGGCCTCTTG ATCTGAGTGC GCTGACTGGC TGA
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Protein sequence | MQDIHGYHAH IYFNAQTLDQ ARALCEAATE KFAVQMGRVH QKLVGPHPDW SCQLAFGHEQ LADVTLWLAL NRDGLVVFLH PLTGDELRDH TDHAIWMGAV RPLDLSALTG
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