Gene PSPTO_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0130 
Symbol 
ID1181738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp154316 
End bp155446 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID637391507 
Producturoporphyrin-III C-methyltransferase, putative 
Protein accessionNP_789989 
Protein GI28867370 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATACG TGAGCGAAAC AGCCTTGCCT AAAGACGAAG AATCGGTGTT GAAAACGCCT 
GCATCCAAGC CTGAACCGGT ACGCGTCGAG CGGACCGGCA ACCGCAGCAG CGGTCTGGTA
TTTCTGGCGC TGCTGCTTGG CATCGCCGGT ATCGCCGTCG CGGGCTGGGG CGTCTGGCAA
CTGCGTATGC TGCAAGCCGG ACACCAGCAG CAGCGCGGTC AGGTCGAGGA CATCGCCGAG
CAGACGCTGG TGCTGGCGCA GAATGACCAG CAACTGAGCG CGCGACTCGC GCAATTGCCG
CCAGCCAATC AACTGGAAGA CAGTCGCCGT CTGGTCGCGC AGTTGCAGGG CGATCAGCAG
CGTCTGAGCC AGCGACTCGA AACTGTTCTG GGTGCCAGCC GCAAGGACTG GCGTCTGGCC
GAGGCTGAAC ATCTGCTGCG CTTGGCCAGC CTGCGTCTTT CGGCGCTGCA AGATATCAAC
AGCGCCCAGG CACTGGTGCA GGGTGCCGAC GAAATTCTGC GTGAGCAGGA TGATCCGGGC
TCCTTCGCTG CCCGCGAGCA ACTGGCCAAG AGCCTTGCCG CCCTGCGCAG TGTCGAGCAA
CCGGACCGCA CCGGGCTGTT TCTGCAACTA GGCGCCTTGC GTGAGCAGGC CGTACAGCTC
AACAAGCTGG CGCCCGAGTA CGAAGACAAG GGCGAGTCGC TTCTGGGGCT GACTGCCGAC
AACACCGAGC AAAGCCGCTG GTCGCAATGG TGGGACGAGA TTTCCCATTA CTTCCGTGTC
GATTTCAACG CTAACAAGGA CATCCGCCCG GTATTGGCAG GGCAAAGTCT GGCACAAGTG
CGTCTGGCCC TGAGCCTGGC ACTGGAGCAG GCGCAATGGG CGGCGCTCAA CGGTGAACCA
CAGGTCTACA GCCAGGCCAT CACCGAAGCG CAAAACGTAC TGAAAGCCAA CTTCAACCAG
GACGACCCAC AGAGCAAGGT GCTTGGGCAG GGGCTTGAGG CGCTGGCCAG CAAGCCGGTA
TCGGTCAAGA CCCCCGACCT GGCCCCGACC CTGAGCTCGG TGCAAGCCTA CCTTGAACGC
CGTCACGCCG CCGGCCAGCC AGCCGAGGCG CAGCAGGGGA CCAGCCGATG A
 
Protein sequence
MGYVSETALP KDEESVLKTP ASKPEPVRVE RTGNRSSGLV FLALLLGIAG IAVAGWGVWQ 
LRMLQAGHQQ QRGQVEDIAE QTLVLAQNDQ QLSARLAQLP PANQLEDSRR LVAQLQGDQQ
RLSQRLETVL GASRKDWRLA EAEHLLRLAS LRLSALQDIN SAQALVQGAD EILREQDDPG
SFAAREQLAK SLAALRSVEQ PDRTGLFLQL GALREQAVQL NKLAPEYEDK GESLLGLTAD
NTEQSRWSQW WDEISHYFRV DFNANKDIRP VLAGQSLAQV RLALSLALEQ AQWAALNGEP
QVYSQAITEA QNVLKANFNQ DDPQSKVLGQ GLEALASKPV SVKTPDLAPT LSSVQAYLER
RHAAGQPAEA QQGTSR