Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0102 |
Symbol | |
ID | 1181710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 122249 |
End bp | 122602 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391479 |
Product | endoribonuclease L-PSP family protein |
Protein accession | NP_789961 |
Protein GI | 28867342 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAATCC AGCGCCAGCT CACCAATGAG CGCATGAGTC AGGTCGTCGT CCACAATGGC ACCGTTTATC TGGCGGGGCA GGTAGGCGAT GACATGACTG CGGGTGTCGA GCAGCAAACC CGAGAGGTGC TGAACAGCAT CGAGCGTTTG CTCGACCTGG CCGGCACCGA CAAAACGCGC ATTCTGTCGG TCACGATCTA CCTCAAAGAC ATCGACGCTG ACTTCGCGGG CATGAACAGC GTCTGGGACA AATGGCTGCC CAAGGGCTTC GCACCTGCGC GTGCAACGGT CGAAGCCAAA CTGTGCGAGC CGCAAATCCT CGTCGAACTG TCGGTTATTG CCGCGCTGCC GTAA
|
Protein sequence | MSIQRQLTNE RMSQVVVHNG TVYLAGQVGD DMTAGVEQQT REVLNSIERL LDLAGTDKTR ILSVTIYLKD IDADFAGMNS VWDKWLPKGF APARATVEAK LCEPQILVEL SVIAALP
|
| |