Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0092 |
Symbol | |
ID | 1181700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 111972 |
End bp | 113465 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391469 |
Product | aldehyde dehydrogenase family protein |
Protein accession | NP_789951 |
Protein GI | 28867332 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.769215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC TGACCCGTGC TGACTGGGAA CAACGCGCCC AAAATCTGAA GATCGAAGGC CGCGCCTTCA TTCAAGGTGA ATACACCGCT GCCGCCTCCG GCGAGACCTT TGACTGCATC AGCCCGGTCG ATGGCCGGTT GCTTGCCAAG GTCGCCAGTT GCGATGCCGC CGACGCCCAG CGTGCGGTAG AAAGCGCTCG CAGCGCCTTC GACTCGGGCG CCTGGTCACG ACTGGCCCCG GCCAAACGCA AGGCCACCAT GATCCGTTTC GCCGGGTTGC TTGAGCAGAA TGCTGAAGAA CTGGCCTTGC TTGAAACGCT GGACATGGGC AAGCCGATCA GCGACTCGCT GGGTGTCGAC ATACCCGGCG GCGCCCGGGC CCTGAGCTGG AGCGGCGAGG CGATCGACAA GCTGTATGAC GAAGTCGCCG CAACACCTCA TGACCAACTG GGCCTGGTAA CCCGCGAGCC GGTCGGTGTT GTGGCTGCTA TCGTGCCGTG GAATTTCCCG CTGATGATGG CCTGCTGGAA GCTCGGCCCT GCGCTGTCCA CCGGCAACTC GGTGGTGCTC AAACCGTCGG AAAAATCCCC GCTGACGGCC ATTCGCATCG CGCAATTGGC TATCGAGGCC GGCATTCCGG CGGGCGTGCT CAATGTGCTG CCGGGTTACG GCCACACCGT TGGCAAGGCG CTGGCGTTGC ACATGGATGT GGACACGGTG GTGTTCACCG GCTCGACCAA AATCGCCAAA CAACTGATGA TCTATGCGGG CGAATCGAAC ATGAAGCGCG TCTGGCTGGA GGCCGGCGGC AAAAGCCCGA ACATCGTCTT TGCCGACGCC CCTGACCTGC AGGCAGCCGC CGACTCCGCC GCCAGCGCAA TTGCCTTCAA TCAGGGCGAA GTCTGCACGG CGGGTTCGCG CCTGCTGGTC GAACGCTCCA TCAAGGATCG CTTCCTGCCA ATGGTGATCG AAGCCCTTGG CACCTGGAAA CCCGGCAATC CGCTGGACCC GGCGACCAAT GTCGGCGCAC TGGTCGATAC TCAGCAGATG AACACAGTGC TGTCTTACAT CGCAGCCGGG CATACCGATG GCGCCAGGCT GGTCGCGGGC GGCAAGCAAA TTCTGCAGGA GACTGGCGGG ACTTACGTCG AGCCAACGAT TTTTGACGGC GTGAACAATG CCATGAGGAT CGCGCAGGAA GAAATCTTCG GCCCGGTGCT TTCGGTGTTG ACGTTCGACA CAGCCGAAGA AGCCATCCAG ATCGCCAACG ACACGCCATA CGGCCTGGCC GCTGCGGTAT GGACCGCGAA CCTCTCCAAG GCGCACCTGA CCGCCAGAGC ACTGCGCGCG GGCAGTGTGT GGGTCAACCA GTACGACGGC GGCGACATGA CCGCGCCGTT CGGCGGCTTC AAACAATCGG GCAACGGCCG CGACAAATCG CTGCACGCGT TCGACAAATA CACTGAGCTG AAATCCACCT GGATCAAGTT GTAA
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Protein sequence | MTTLTRADWE QRAQNLKIEG RAFIQGEYTA AASGETFDCI SPVDGRLLAK VASCDAADAQ RAVESARSAF DSGAWSRLAP AKRKATMIRF AGLLEQNAEE LALLETLDMG KPISDSLGVD IPGGARALSW SGEAIDKLYD EVAATPHDQL GLVTREPVGV VAAIVPWNFP LMMACWKLGP ALSTGNSVVL KPSEKSPLTA IRIAQLAIEA GIPAGVLNVL PGYGHTVGKA LALHMDVDTV VFTGSTKIAK QLMIYAGESN MKRVWLEAGG KSPNIVFADA PDLQAAADSA ASAIAFNQGE VCTAGSRLLV ERSIKDRFLP MVIEALGTWK PGNPLDPATN VGALVDTQQM NTVLSYIAAG HTDGARLVAG GKQILQETGG TYVEPTIFDG VNNAMRIAQE EIFGPVLSVL TFDTAEEAIQ IANDTPYGLA AAVWTANLSK AHLTARALRA GSVWVNQYDG GDMTAPFGGF KQSGNGRDKS LHAFDKYTEL KSTWIKL
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