| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0087 |
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| Symbol | |
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| ID | 1181695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 108910 |
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| End bp | 110496 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391464 |
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| Product | bacterial extracellular solute-binding protein, family 5 |
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| Protein accession | NP_789946 |
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| Protein GI | 28867327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTTG CTGCACTTCC CTTTTTGCTT GCCTCCACGC TACTCCCGCT TACCGCACAG
GCGTCGAGCC TTGCGGTCTG CACTGAAGCC AGCCCCGAGG GTTTCGATGT GGTGCAGTAT
AACTCGCTGA CCACCACCAA CGCGTCGGCT GATGTGCTGA TGAACCGTCT GGTGGACTTC
GATGCCAAGA GCGGCAAGCT GGTGCCGAGC CTGGCGCAAA GCTGGACCGT CTCCGCCGAC
GGCCTGACCT ATGATTTCAA GCTGCGCACC GGGGTGAAAT TCCACACCAC CGACTACTTC
ACGCCGACCC GCGAATTGAG CGCGGATGAC GTGCTGTTCA GCTTCCAGCG CATGCTCGAC
CCGCAGAATC CGTGGCACAA GATTGCCCAG AGCGGCTTCC CGCATGCGCA GTCCATGCAG
TTGCCTGCGC TGATCAAAAG CATCGAAGCG CCTGACGCTC ATTCGGTCCG CTTCACGCTC
AATCGAGCCG ATTCGACTTT CCTTGCCACG CTGAGCATGG GTTTTGCGTC GATCTACTCG
GCGGAGTACA CCGCGCAGCT CCTGAAAGCG GGCACGCCGG AAAAACTCAA CAGCCAGCCA
ATCGGCACCG GGCCGTTTGT CTTCAAGCGC TTCCAGAAAG ATGCCGTGGT GCGTTACGAA
GCGTTCAAGG ATTACTTCGC CGGCAAGTCG GATATCGACA CGCTGGTGTA TGCCATTACG
CCGGACGCCA ATGTGCGCCT GCAGAAAATT CGTCAGGACG AGTGCCAGAT CGCCCTGTCT
CCCAAGCCGC TGGATATTCA GGCAGCCAGC AAGGACGACT CGCTGAAGGT CGAAAAAACC
GACGCGTTCA TGACTGCATT TGTTGCGATC AACAGCCAGC ACCCGCCGTT CGACAAGCCC
GAAGTTCGTC AGGCAATCAA CCTGGCTTTC GACAAGGCCA ATTACCTGAA AGCTGTATTT
GAAGGCACCG CCGGCGCTGC CAATGGCCCT TATCCGCCCA ATACCTGGAG CTACGCCAAA
GACCTGCCTG GCTATCCGCA CGATGTTGCC AAAGCCAAGG CATTGCTGGC CAAGGCCGGT
TTGAAAGACG GCTTCAAGAC CACTGTCTGG ACACGGCCTT CCGGCAGCCT GTTGAACCCC
AACCCCAGTC TGAGCGCGCA ATTGCTCCAG GCTGATCTGA AGCAGATCGG TATCGACGCC
GAGATCAAGG TGATCGAGTG GGGCGAGCTG ATTCGGCGCG CCAAGGCCGG TGAGCATGAT
CTGCTGTTCA TGGGCTGGGC GGGCGATAAT GGCGATCCGG ATAACTTCCT GACGCCTCAG
TTCTCGTGCG CTGCGGTGCA ATCGGGGACC AACTTTGCGC GTTATTGCGA CAAGACCCTG
GACAAGCTGA TCGCTGACGG CAAATCCACC AGCGATCAGG CCGAGCGCAG CAAGCTGTAT
CACCAGGCTC AGCAGCAGAT CCAGCAACAG GCGCTGTGGA TCCCCCTCGC CCACCCGACA
GCCGCTGCAC TGGTGCGCAA GGACGTTTCG GGCTATCAGG TCAGCCCCTT CGGACGGCAG
GACTTTTACA AGGTGCAGGT GAAGTAA
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| Protein sequence | MRLAALPFLL ASTLLPLTAQ ASSLAVCTEA SPEGFDVVQY NSLTTTNASA DVLMNRLVDF
DAKSGKLVPS LAQSWTVSAD GLTYDFKLRT GVKFHTTDYF TPTRELSADD VLFSFQRMLD
PQNPWHKIAQ SGFPHAQSMQ LPALIKSIEA PDAHSVRFTL NRADSTFLAT LSMGFASIYS
AEYTAQLLKA GTPEKLNSQP IGTGPFVFKR FQKDAVVRYE AFKDYFAGKS DIDTLVYAIT
PDANVRLQKI RQDECQIALS PKPLDIQAAS KDDSLKVEKT DAFMTAFVAI NSQHPPFDKP
EVRQAINLAF DKANYLKAVF EGTAGAANGP YPPNTWSYAK DLPGYPHDVA KAKALLAKAG
LKDGFKTTVW TRPSGSLLNP NPSLSAQLLQ ADLKQIGIDA EIKVIEWGEL IRRAKAGEHD
LLFMGWAGDN GDPDNFLTPQ FSCAAVQSGT NFARYCDKTL DKLIADGKST SDQAERSKLY
HQAQQQIQQQ ALWIPLAHPT AAALVRKDVS GYQVSPFGRQ DFYKVQVK
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