Gene PSPTO_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0032 
Symbol 
ID1181640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp40884 
End bp41852 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content49% 
IMG OID637391411 
Producthypothetical protein 
Protein accessionNP_789893 
Protein GI28867274 
COG category 
COG ID 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACC GAAAATTAAG CCCTGATAAA ACACAGCCAA TATATGCTCC CAACAATGCT 
TTTCTGGACG AATGCGTTCG AGTCGAAATC ATTAATATTC TGCCGCTGAA GGTCTTACGT
CCTGCGGTCA AAGAGAGTAC TAAGTATCAT CAAATTCTTG CCTCTATCCA AGATGTAGGA
CTAGTGGAGC CGCCAGCTGT CACACCTGCA CCGGGCACCA GTGGACAATA TTTTCTGCTC
GATGGCCATC TGCGCATTGA AGTTCTGAAA GATTTAGGCG AGCTAAAAGT AGATTGCTTG
GTAGCAACTG ACGATGATAC TTATTCGTAC AATAAACGTA CTAATCGATT ATCCGCTGTC
CAAAGTAACA AAATGATCGT ACGAGCAATG GAACGAGGCG TATCAGCCGA AAGGCTTGGT
AAAGCCCTCG GGCTATCACC GCAGACCATC AGGCAGAGAT TTCGCCTGCT TAATGGTATT
TGCGCAGAGG TCGTAGCCCT TTTGGGTGAC ACGGACTGCC CGGCCAATGT ATTTAACCTG
TTACGGCAGA TGAAACCCTT AAGGCAAATC GAAGCAGCAG AACTGATGAT TGGGAACAAA
AACCTATCGG TTCTCCTTGC TAAAGCACTA TTAGCGGCCA CACCACCCGA CCAGCTCGTG
ATGATAAAAA AGCCTTCTCA AGATCATCAG GTTTCTGCGG AGTCCATGGC ACGCTTGGAG
CGCGAGCTAG CTGCCTTGCA GATGCAGATC AAGACAGTCG AAGAGGACTA TGGGCCTGAT
GTCCTTCATT TGACGGTTAT AAAAGGCTAC CTGACCAAGC TTCTCGCCAA CGCTGCCGTT
GTGCGGTGGT TAGCTCGGCA CCAACCAGAG TACCTGAAAG AATTCCAGTC CATTGCCGAG
TTGACCGAAC TGCCTTGGGC AGACAACGGG CCCGAAGATG ATTTACAGAG CACCACTGCC
GAGGGTTGA
 
Protein sequence
MSNRKLSPDK TQPIYAPNNA FLDECVRVEI INILPLKVLR PAVKESTKYH QILASIQDVG 
LVEPPAVTPA PGTSGQYFLL DGHLRIEVLK DLGELKVDCL VATDDDTYSY NKRTNRLSAV
QSNKMIVRAM ERGVSAERLG KALGLSPQTI RQRFRLLNGI CAEVVALLGD TDCPANVFNL
LRQMKPLRQI EAAELMIGNK NLSVLLAKAL LAATPPDQLV MIKKPSQDHQ VSAESMARLE
RELAALQMQI KTVEEDYGPD VLHLTVIKGY LTKLLANAAV VRWLARHQPE YLKEFQSIAE
LTELPWADNG PEDDLQSTTA EG