Gene PSPTO_0027 details

Gene Information

• Locus tag: PSPTO_0027
• ID: 1181635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 33254
• End bp: 33976
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637391406
• Product: hypothetical protein
• Protein accession: NP_789888
• Protein GI: 28867269

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTCA GAAATAAGGG CGTTAAGCCT GTACGTGACG TTGCCAAGCG TACCAAACGG 
GGTCGCCGAG CTTATATCGT GCCGACGGAT CGCAACGCGA ATGGGATTGT CGCGGGCGAG 
AGTTTTCTTG AGCGCAACCA CTTGCTGCTT CTCAGCCTCA TGCCTGGATT CACGCGGATA 
TCCGACCAGT CAATCTGTGT CGACCTGGAA AACGAAAATC TGCTTATTAG CCGACAGGAC 
TTGCCCAAGA AAGACGGTAA AAAGGCTGTG GCTTACACTG CTGACAGTGA AATTGAGCGG 
CATGACGGAC AGATCTTTAT CTGCGAGAGC AAACCCAGCG CTTTCTTAGA GAAGCACGCG 
GATAAGCATG CTCGGGCTGA ACGCATCTTG GCCACATATG GCAAGCAATT TATCACCTTC 
ACCGAGGAGA AATTCTCTCC GGTGTTCATC TCCAATCTGG AAAATTTGAA AAAGGCGCTT 
AGTCCTGCCC AAAAGGAACG CGCGGCAGGT GCCTGTGAAA AGGTAGGCAT CGCGTTAAAA 
AATCGTAAGC GGTGGCCGAC CCTAGAGCTT AAAGAATCTG GGGCACTATC TAATGCGGAC 
ATTTTTTTTG GATTGGCATA TGGGGTGCTG AGCGCGGACT TGTCGGAGAA TGTTTTCTCG 
GGGGATGGCT GGGTCAATGC GGCGCACGGC TCGTTGGATC ATCTGAAGCT AATGGACATC 
TGA 

 

Protein sequence

MPVRNKGVKP VRDVAKRTKR GRRAYIVPTD RNANGIVAGE SFLERNHLLL LSLMPGFTRI 
SDQSICVDLE NENLLISRQD LPKKDGKKAV AYTADSEIER HDGQIFICES KPSAFLEKHA 
DKHARAERIL ATYGKQFITF TEEKFSPVFI SNLENLKKAL SPAQKERAAG ACEKVGIALK 
NRKRWPTLEL KESGALSNAD IFFGLAYGVL SADLSENVFS GDGWVNAAHG SLDHLKLMDI