Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0020 |
Symbol | |
ID | 1181628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 25187 |
End bp | 25537 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637391399 |
Product | hypothetical protein |
Protein accession | NP_789881 |
Protein GI | 28867262 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCCC TCAGACTTAC ACATGTACCA GGTTGCTGGG TCAGCCAGAA ATTACCCAGC GGCCAAGAGG AGCGTCGGGG CATTGTCAAA ATGGCGATTG CTAAAGAATC CGAAGATCAA CTTCAGGTTC ACTGGTTTAG CCCTGAGAAA AAGCTGGCCT ATGTCGATGC TTCCGCCGTG CACTCAGGCT TTCAAAATGG CATGGACGTG GTCGATGAGA CCCCTGGCAG CGGCGTCCTC TCGCTAGGGC AGGGCGTCAT CATGCAACAA CGCACCTTGG CAGGTAGCGA ACAAGTGTTG GTGGACTTTC CTGAACGTGG TGAGCGCCAT TGGTTGTCAC CGCCACTGTA A
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Protein sequence | MKPLRLTHVP GCWVSQKLPS GQEERRGIVK MAIAKESEDQ LQVHWFSPEK KLAYVDASAV HSGFQNGMDV VDETPGSGVL SLGQGVIMQQ RTLAGSEQVL VDFPERGERH WLSPPL
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