Gene PSPTO_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0020 
Symbol 
ID1181628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp25187 
End bp25537 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content54% 
IMG OID637391399 
Producthypothetical protein 
Protein accessionNP_789881 
Protein GI28867262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCC TCAGACTTAC ACATGTACCA GGTTGCTGGG TCAGCCAGAA ATTACCCAGC 
GGCCAAGAGG AGCGTCGGGG CATTGTCAAA ATGGCGATTG CTAAAGAATC CGAAGATCAA
CTTCAGGTTC ACTGGTTTAG CCCTGAGAAA AAGCTGGCCT ATGTCGATGC TTCCGCCGTG
CACTCAGGCT TTCAAAATGG CATGGACGTG GTCGATGAGA CCCCTGGCAG CGGCGTCCTC
TCGCTAGGGC AGGGCGTCAT CATGCAACAA CGCACCTTGG CAGGTAGCGA ACAAGTGTTG
GTGGACTTTC CTGAACGTGG TGAGCGCCAT TGGTTGTCAC CGCCACTGTA A
 
Protein sequence
MKPLRLTHVP GCWVSQKLPS GQEERRGIVK MAIAKESEDQ LQVHWFSPEK KLAYVDASAV 
HSGFQNGMDV VDETPGSGVL SLGQGVIMQQ RTLAGSEQVL VDFPERGERH WLSPPL