Gene PSPTO_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0015 
Symbol 
ID1181623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp19321 
End bp19932 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID637391394 
Producthypothetical protein 
Protein accessionNP_789876 
Protein GI28867257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCC GAGAAGCCAA CCTCATCGCC CACCGCTACC AAGCACGTGC ACAAGCTTTC 
AACGATTTGC ATGCGCTATT GGCCCCGTTC TTTCGCCGCA CTCCCCTGGC GGCCAGCATG 
AACGAGATCA GTGAGTGCGT CTCCGAAGCC CTGCATGCCA ATACCTTGTG CGGTTGGTTG 
CCAGATTTCG GCGATTTCGA TGAGCTAGAG GCACTGGTTG GAGAGATCCG CCGGGATGGA 
GGACGCAAGC GTTTTACAAG TCTGAACGAC ATCCCCACCC ACCTGCGGGA GCACTTCGAC 
GATACAGACG AGGCATTCAC CGAATTCGCC AATGAAATTC GCGAAGAGTG CCGCGACGGC 
TATGACTCAC TGCTCGAACA GCAAGAGATA CTTAACGAAC ACTTGGAATC TGTTCGATTC 
GATCAGGTGT TCGCATTCGA TGAAGACAGC CTGGAAGTCG AAACCACTAG ACTGATCAAC 
CAGGTGTTCG ATCACCTGCA TACTGAGTGG CTCGCATACG AAAAGCTGGC TCGCAGCCTG 
GTCGGCATGG CCCACCTCAT CGATGAACCG GATCCCGACA AGGGGCTGAC CGAGGCCCTG 
CTGTTCGATT GA
 
Protein sequence
MNAREANLIA HRYQARAQAF NDLHALLAPF FRRTPLAASM NEISECVSEA LHANTLCGWL 
PDFGDFDELE ALVGEIRRDG GRKRFTSLND IPTHLREHFD DTDEAFTEFA NEIREECRDG 
YDSLLEQQEI LNEHLESVRF DQVFAFDEDS LEVETTRLIN QVFDHLHTEW LAYEKLARSL 
VGMAHLIDEP DPDKGLTEAL LFD