Gene PSPTOA0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0056 
SymboltraR-2 
ID1187346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp56876 
End bp57271 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content55% 
IMG OID637408389 
ProducttraR protein 
Protein accessionNP_808714 
Protein GI29171530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.708954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAG ACGTAATGCT GTGCGCTGCT GTTCGCCTGT CGATTTTCAA AGATGGTCTG 
CGTCAACACA TATTGAAAGG CCTGGCGGCA GCGATAGCTG CCAACCCAGT GCTGGCTTTT
GCCGGTGCCG GCGGTGCCGA CATTGCCGGG ATGGGTAATT CGGCGGCAGT GGGCGCCAAG
TCGTTGCAAA AGAATGCGCT GACCATTGCT CAGTTTGTGG GGGTAGTGTT TGTGATCACT
GGGTTGGTTG CTGCCAAGAA CAAAAAGGAC AACCCTCAGA TCAAAACTGG CCATATCGTG
GGGTCCATCC TGTTTGGCGT GTGCCTGGCA GTGATCCCGG AAATCATCAA GCGCTCGCAA
GCTCAAGTTG GCCTGGCACC CGTGGATGTG GGCTAA
 
Protein sequence
MSKDVMLCAA VRLSIFKDGL RQHILKGLAA AIAANPVLAF AGAGGADIAG MGNSAAVGAK 
SLQKNALTIA QFVGVVFVIT GLVAAKNKKD NPQIKTGHIV GSILFGVCLA VIPEIIKRSQ
AQVGLAPVDV G