| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0049 |
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| Symbol | |
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| ID | 1187339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | + |
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| Start bp | 47811 |
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| End bp | 51980 |
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| Gene Length | 4170 bp |
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| Protein Length | 1389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637408382 |
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| Product | DNA primase, putative |
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| Protein accession | NP_808707 |
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| Protein GI | 29171523 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG AAACAGCCCC TCGCACATCC GAATACCCGG TCTGGTTGGC AGTGCCGCCT
GACGATCGTG AAAAAGCACG TCTGTCTGCT GGACGACTCA GTGACGGTCG TGCGGCTATT
GCCTGGAACA AAGAAGAAAA GCTTTGGTTT GCCAGACCTG GATGTGACCT TGATCGCATC
ACCGCCTGGT TGCCTGATCC AAGCCGCCGT GCCGGTGGTG GTGACGCCGA ATCAGAGTTT
CTAGATGTAC TGACTCAAGC CGGCCTGGTG GTCAAAGGCA TGCCGGTGAT GGACGGTAGT
CGGCAGCGTG TCGCGACGGT CGATGACAAG CACGGCAAGA AAAGCGGCGT CTATTGTGGC
TTTCTGGATC GTCGCCCTGC AGGCTGGTTC ATCAACTACC ACCGTGCCGA TTCGCCCAAG
GATGTAACCA ACTGGGCGGC GACTGGCGGT GAATCTGATC CGATCACCCG CCTGCACATT
CGGGCCGGGG CCAAGCAAGC CCAGGAAGAC GCCGCTCGTG ATCGCGCTGT TACCTACGCC
AAGCAGACGT TGGCTGCCAA GAGACTTTAC GACCGGCTGC CCGCCGCAGA CCCTGCGCAC
CCCTACCTGG TGCGGAAGGG AATACCCCCG ACGCCCGACA TTCGTCAAAC ACGAAACGGT
GCCCTGGTGG TGCCGTTTTT TAATGCCTCG GGAACGTTCA AGACGCTGCA GTACATCCCA
CCCGAGGGTG AGAAGTTCCT CTTCAAGGAT GCCCCCAAAC AAGAGCATTT CCTGGTGGTG
GGCGGCTCGC TCGATCCGGT CAACCCCATC CTGTATGCCG AGGGCTATGC CACTGCGCGC
AGCCTGAACC TGGCCACCGG CCTGCCGGTG GTGATGACCA TTGACGCCGG CAACATGGTG
GCGGTGGCCA AGGTGCTGCA TCAGCAGTAT CCCGACAGTC GGCACCTGTT CATGGCGGAT
TTCGATCATG CCAAGGACGT GAACAAGGGG TTGATCATGG CCAATGAGGC GGCCATAGCG
GTGGGGGGCC AGGTTCTGTA TCCAACGTTC AACGACGCCG AAATTGCCCG TGGGTTCACG
GACTTCAACG ACCTTCACCA ATCACGAGGA CTGGACGCGG TGCGCGAACA GACCGCTCCC
CTGATTCGAC CGTATGAAGA GGTAACTACC ATGCCGACAG ATTCGAACAC TCAGTCTCCG
GACAATACTG CGCAAAAGGT AGCAACTCCC GCGCAAGAAA CGCTGGAACT GGATGCAGCG
CCTGCAGCTT CAATACAGGT CCCGGATCAA TCCGCACCGC CGCAGACCCG TAGTGCTCAA
CCGGTTGCAT CTGAAGCGTC ATCTGTTGAA AGCCAGTCGC CCGAAACTGC CCAGGTCACT
GAAGCACCTG TTGGCATTGA TGATGCGCAG GTATCCACCC AGCCACCTTT GGCGTTGTCA
CCTGCTGAGC AACTGGCGTC GGTAGAGGCC GATCCTGACG CTTCCGCGAT CGTTGACGAA
CAGCCCAAAG CGACAATGTC TGTGGCGACA GACCGCAACA CGCCGTCTGA CGCGCCTGAA
CTCACCCAGC CTACCTCGGC GGAGGTCGTG CCAGAGCAGT CTAACGAAAC CGCTCAACCA
GATGCGCGCT CTGCTCAACA ACAGGCACCG GGAGAGGCCG ACCCAGGCTC TTCTGCCAAC
GTGGATGATC AGAAGAGGGC GGCACCACCT GCGGCGACAG ACCAAGAAAT GTCCTCTGAC
GCGCCTGTAC TCAACCAGCC ACCTTTGGCG GCGGCCGAGC CAGAGCAGTC GAACGAGACT
GCTCAACAAC AGGCACCGGG AGAGGCCGAC CCAGGCTCTT CTGCCAACTT GGATGATCAG
AAGAGGGCGG CACCACCTGC GGCGACAGAC CAAGAAATGT CCTCTGACGC GCCTGTACTC
AACCAGCCAC CTTTGGCGGC GGCCGAGCCA GAGCAGTCGA ACGAGACTGC TCAACAACAG
GCACCGGGAG AGGCCGACCC AGGCTCTTCT GCCAACGTGG ATGATCAGAA GAGGGCGGCA
CCACCTGCGG CGACAGACCA AGAAATGTCC TCCGACGCGC CTGTACTCAA CCGGCCACCT
TTGGCGGCGG CCGAGCCAGA GCAGTCGAAC GAGACCGCTC AACCAGCTGC GCCTCCTGCT
AAACAACAGG CGTCAGTAGA GGCTGATCCT GACACTTCCC CCGTCGCTGA GGATCAACCG
ATAATCGCAC CGGCAGGGCC TGCTCAAAAC GAAGACAATG AAAGCCTTTC AGACGTGGAG
GTTCCGGTGT CAGGGGCCCT GCCGCGTCGT TTCACCACAG CACGCAAGAC CGGCCCGGCG
GTCGTACCGG ATGCTATCTT CGTAGGGGCT CCGATAGGTG CCGACGAGCC ACAACTGCAA
GCCAGCAACA TCGACAAAGA CGCTCTGTTG GCCCGCATCA GCCGTGAGGT TCAAGGTGAC
AATTCGGTGC TCTACAAGCT CGATGCCGAG CCTGCTTTCG TTGACCGTGG GTCGCGCCTG
GAGATGGTCC AAGGCGCAGG TCAGGAAGAT GAGAAGGTAA TAGCTGCGTT GCTCACGGCA
GCACAGTTCT ACCGGGGGCG CATCGAACTG ACCGGCAGTG ACGAATTCAA GGCAAAAGCC
ATCGAGCTGA TTGCTCAGCA CCAGATCAAT GTGGAGATGA AGAACCCTGC GCAGCAAATG
TTGCTGGACG ATGCCCGTAA CGCGTTGAAG CAGCCACCTG TAACGCTTGA TGCCATTCAT
GGTGATACCC CACCGCCGTA TGGTGGTCCA CAGCCGTCAC AGGCGAAGCC CTCGGCACCG
CAACCTCAAC AAGCCGCGCC GGCACCGGTG CATTCGTCTG CGCCCGCGCC GGCGAGTACC
GCTTACCAGC CTCTGGAGGT TGAGGGTCTG CAACGGCGGC CGGCTCAATC TGCCCCACAG
GCACAGGCCC CGCAAGCGGG CGTTGCACCG CAACCTCAAC AAGCCGCGCC GGTACATTCG
TCTGCGCCCG CTTCGGCAAG TACTGCTTAT CAGCCGCTGG ACGTTGAGGG TCTGCAGCGG
CCACTGGTTC AACCTGCACC ACCGGCACAG CCGGACGCAC CGGTCATCAA TCCGCCCTCG
GCAGCTCCAG CATCGGATCA GCCTGCAACG TCAGCGAATC AGCAGGTGTC GCCCGCCATC
CATCAGCCTT TCCAGGCGGC CAAGGATGGC GTGACAGGCA AGATCCTCAA ATTTGGCCAG
AAGCCGTTTC GTTTTGAGCC AGACAAGCCC GAGAGCACCT TCATCACACT GCGTACCGTG
AACGGTGTTC AGACTTTTTG GGGCAAGGAG CTGGCGGGGC TGCTGCGCCA AACCCGTGTG
CAGCCAGGCA AGATGGTGAC GTTGCAGTGG CTGGGCAATC ATCCGGTTAC CGTCAAGGTG
CCCCGCAAAA ACGAGCAGGG CGTCACCGTG GGTTACGACG ATAAAGACGT TCATCGCAAC
CAATGGGCCC TTAAGGTAGA GGGTAACCCC GCAGTGCGTT CTGGCCAGGA TGAGGGCGTC
AAACTCGGCG CCTATGACGC CGGGCGTTTC GCCGTGGTGC AACAAGCCTG GCTTGCGCAA
CTGGGCGTGG AGGCTCCCTT GCCCACGCCA CCCACGGATG GCCTGTATTG GTTGACCCCA
AACGGTGAAG GCAGCGCAAA AACGGGTGAT GAGCTGTCAG CCCCTCGGCC GCCGATCGAC
CCCAACAACA CAGCGGGACA ACCCGTCATC AGCAGTTGGT CACGGGATGG CCATCTGGAC
ATGTACCTGG TGCGCGGCGA TGGTCCCTAT CTGCAAGGTG TGGTGCGTCA GGGGGATCAG
ATGCAGCATG TATTGGTGAG TCTTCCAGGC CGTGACGATG GGCCTTCGAT GGTGTTTAAC
GCCATTACCC CCGAGGGACT GCTGCCGATC GGCACGGGCA ATGGCATCAA CCGCTCTGGT
GGCGAGCCGG TGTCGAGAGA GCACATTGCC TTCAAGCTTG AAGGCGACAG CGCTGTGCGC
ATTGGCAAGC TTGATGCGCC TGGCGAGGTG CCCCCGACCT TGCACAACCT ATTGGGCTTC
GATCAGCGCT GGAAAGAGGA AAACACCCTC CCAAAGTCAG CTCCCACAGC GGCACCGTCA
GTACAGCCGA GCGATCCACG TCCGGTGTAA
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| Protein sequence | MKIETAPRTS EYPVWLAVPP DDREKARLSA GRLSDGRAAI AWNKEEKLWF ARPGCDLDRI
TAWLPDPSRR AGGGDAESEF LDVLTQAGLV VKGMPVMDGS RQRVATVDDK HGKKSGVYCG
FLDRRPAGWF INYHRADSPK DVTNWAATGG ESDPITRLHI RAGAKQAQED AARDRAVTYA
KQTLAAKRLY DRLPAADPAH PYLVRKGIPP TPDIRQTRNG ALVVPFFNAS GTFKTLQYIP
PEGEKFLFKD APKQEHFLVV GGSLDPVNPI LYAEGYATAR SLNLATGLPV VMTIDAGNMV
AVAKVLHQQY PDSRHLFMAD FDHAKDVNKG LIMANEAAIA VGGQVLYPTF NDAEIARGFT
DFNDLHQSRG LDAVREQTAP LIRPYEEVTT MPTDSNTQSP DNTAQKVATP AQETLELDAA
PAASIQVPDQ SAPPQTRSAQ PVASEASSVE SQSPETAQVT EAPVGIDDAQ VSTQPPLALS
PAEQLASVEA DPDASAIVDE QPKATMSVAT DRNTPSDAPE LTQPTSAEVV PEQSNETAQP
DARSAQQQAP GEADPGSSAN VDDQKRAAPP AATDQEMSSD APVLNQPPLA AAEPEQSNET
AQQQAPGEAD PGSSANLDDQ KRAAPPAATD QEMSSDAPVL NQPPLAAAEP EQSNETAQQQ
APGEADPGSS ANVDDQKRAA PPAATDQEMS SDAPVLNRPP LAAAEPEQSN ETAQPAAPPA
KQQASVEADP DTSPVAEDQP IIAPAGPAQN EDNESLSDVE VPVSGALPRR FTTARKTGPA
VVPDAIFVGA PIGADEPQLQ ASNIDKDALL ARISREVQGD NSVLYKLDAE PAFVDRGSRL
EMVQGAGQED EKVIAALLTA AQFYRGRIEL TGSDEFKAKA IELIAQHQIN VEMKNPAQQM
LLDDARNALK QPPVTLDAIH GDTPPPYGGP QPSQAKPSAP QPQQAAPAPV HSSAPAPAST
AYQPLEVEGL QRRPAQSAPQ AQAPQAGVAP QPQQAAPVHS SAPASASTAY QPLDVEGLQR
PLVQPAPPAQ PDAPVINPPS AAPASDQPAT SANQQVSPAI HQPFQAAKDG VTGKILKFGQ
KPFRFEPDKP ESTFITLRTV NGVQTFWGKE LAGLLRQTRV QPGKMVTLQW LGNHPVTVKV
PRKNEQGVTV GYDDKDVHRN QWALKVEGNP AVRSGQDEGV KLGAYDAGRF AVVQQAWLAQ
LGVEAPLPTP PTDGLYWLTP NGEGSAKTGD ELSAPRPPID PNNTAGQPVI SSWSRDGHLD
MYLVRGDGPY LQGVVRQGDQ MQHVLVSLPG RDDGPSMVFN AITPEGLLPI GTGNGINRSG
GEPVSREHIA FKLEGDSAVR IGKLDAPGEV PPTLHNLLGF DQRWKEENTL PKSAPTAAPS
VQPSDPRPV
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