Gene PSPTOA0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0024 
Symbol 
ID1187373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp25096 
End bp25473 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID637408357 
Producthypothetical protein 
Protein accessionNP_808682 
Protein GI29171498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.00016445 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC AAGCAAAGCA ACAGCTGATG AAGCGCTTCA CAAGCGGTCA GGTCGAGATC 
TGCAAAAAGC TGCTGAAACT GAGTCGCCAG GTACACAAGT TCAATGCCCG CGTCGAGTTC
CTGGTGCTGA CGTTCAAGCA TGACCTGGCA GACGCCGTAG TCCGGTATGA ACTTTGGGAC
AACGGTTTCG AAGGCCTGGG CGAACGCCAG TTCGACAACT GCTTTGAAAT GGGTGACTCG
GCCGAGGTGA TCGCCGAACT AATCACCACA GCGCGTCGTG AAGGCTTCGT GGAAAAAATT
CAGACCTGGT GCGGCAACGA ATCGTTTGCC CGCTGGTGCA GCTACGCCGA CCGCCAGGGC
GACCTTTTCG CCGCTTAA
 
Protein sequence
MNRQAKQQLM KRFTSGQVEI CKKLLKLSRQ VHKFNARVEF LVLTFKHDLA DAVVRYELWD 
NGFEGLGERQ FDNCFEMGDS AEVIAELITT ARREGFVEKI QTWCGNESFA RWCSYADRQG
DLFAA