Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6325 |
Symbol | |
ID | 5356294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6542833 |
End bp | 6543615 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640815369 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_001351636 |
Protein GI | 152984954 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACT TTCCGAAGTG GAACGGCCAG GTGGCGCTCA TCAGCGGCGC CGGCAGCGAA CACGGCATCG GTTTCGCCAT CGCCCGGCGA CTGGCCCGCG AAGGCGTGCG CCTGCTGATC ACCGCCAGCA GCGAGCGGAT TCGGCAACGA GCGGAGGAAC TGAGCGCCTG CGGGCACGAG GTGCGCGCCG CCGCCGCCGA TCTGACCGAC GAAGCCCAGG TGCGGGGCCT GCTGGACTGG GCCGAAGCCC AGTGGGGGCG GGTCGATATC CTGGTGAACA ATGCCGGCAT GGCCCAGTTG GGCAGTGCGG AACCCTTCAG CGCCGTGGAA GCGACCTCGC TGCGGGACTG GCAACTGTCC CTGTCGCGCA ACCTGACCAG CGCTTTCCTG CTCACCCGCG GCCTGCTGCC GGGCATGCGC GAGCGCGGCT ACGGGCGGAT CGTCAATGTC GCCTCCACCA CCGGGACCCG CGGCAGCAAC CCGGGCGAAG CCGCGTATAG CGCGGCCAAG GCCGGATTGG TCGGCTGGAG CATGGGCCTG GCGCTGGAAG TGGCGAAGAG CGGCATCACG GTGAACAGTG TCGCGCCGGG CTGGATCGCC ACCGGCTCGA GCACCGCCGA AGAACGCCTG GCCGCCCAGG CCGGGCCCGG CGGACGTGCC GGCCGGCCCG AGGAAGTCGC CGCCGCGGTG GCCTTCCTCG CCTCGCCCGA AGCCAGCTTC GTCAACGGCG AACTGCTGGT GGTGGACGGC GGCAACTGCC TGATCGAGAA CAAACGGAGC TGA
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Protein sequence | MNDFPKWNGQ VALISGAGSE HGIGFAIARR LAREGVRLLI TASSERIRQR AEELSACGHE VRAAAADLTD EAQVRGLLDW AEAQWGRVDI LVNNAGMAQL GSAEPFSAVE ATSLRDWQLS LSRNLTSAFL LTRGLLPGMR ERGYGRIVNV ASTTGTRGSN PGEAAYSAAK AGLVGWSMGL ALEVAKSGIT VNSVAPGWIA TGSSTAEERL AAQAGPGGRA GRPEEVAAAV AFLASPEASF VNGELLVVDG GNCLIENKRS
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