Gene PSPA7_6249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6249 
Symbol 
ID5358484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6462100 
End bp6462837 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID640815293 
Productshort chain dehydrogenase 
Protein accessionYP_001351560 
Protein GI152986072 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TCCTGATCGT CGGTGCCACC TCTGCCATTG CCGAAGCCAC CGCCCGTCGC 
TTCGCCGCCC AAGGGGCCAC ACTGCTGCTC CTGGCCCGTG ATCGCGAACG CCTGCAACTG
CTGGCAACCG ATCTGGAAGT ACGCGGTGCT GCCGCGGTAC ATACCCTCGG CTTCGATGCG
GCCACGAACA ACGACTACCC GGTCCTGGTG CACTCCTGCA TCGAGACCCT CGGCGGCCTC
GACCAGGTGC TCATCGCCCA CGGCACATTG AGCGACCAGA AAGCGTGCGA GCAGAGCGTC
GATCTGACCT TGCGCGAACT GACCATCAAC GCCTTCAGCG TGATCGCTCT GCTCACCGAG
CTGGCCAAGC ATTTCGAGGC CCAGAATTCC GGCTGCATCG CCGTGATCGG CTCGGTGGCC
GGCGACCGCG GCCGCCAGTC GAACTATGTC TACGGTACCG CCAAGGGCGC GCTGAGCCTG
TTCCTGCAGG GATTACGAAA CCGGTTCGGC AAGAGCGGCG TGCAGGTTCT CACCATCAAG
CCCGGATTCG TCGATACACC GATGACTGCG GCCTTTCCCA AGGGGCCATT GTGGGCAAGC
CCGGAGAAGG TCGCCGCAGA TATCGAGAAA GCGATCGCCA AAGGCCGCGA TGTCCTCTAT
ACACCAGGCT TCTGGCTTCC GATCATGGTC ATCATACGGC TGCTGCCAGA ACGTCTTTTC
AAGAAGCTGA GCCTCTGA
 
Protein sequence
MKKILIVGAT SAIAEATARR FAAQGATLLL LARDRERLQL LATDLEVRGA AAVHTLGFDA 
ATNNDYPVLV HSCIETLGGL DQVLIAHGTL SDQKACEQSV DLTLRELTIN AFSVIALLTE
LAKHFEAQNS GCIAVIGSVA GDRGRQSNYV YGTAKGALSL FLQGLRNRFG KSGVQVLTIK
PGFVDTPMTA AFPKGPLWAS PEKVAADIEK AIAKGRDVLY TPGFWLPIMV IIRLLPERLF
KKLSL