| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6068 |
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| Symbol | |
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| ID | 5356571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6274941 |
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| End bp | 6276593 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640815113 |
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| Product | hypothetical protein |
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| Protein accession | YP_001351385 |
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| Protein GI | 152989439 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCCTGC TCCTTCTGGC GGATACGCCA GATTGGGCGC CACTGCTAGG TGAACGCCTG
AGAGCGTTGG GGCCTGCCTT TTCGCTGAGT GTCGTCAGCA CCTGGGAGGG CGCCGCGACC
CTGTTCGCCG CCGAGCCCCA GGGCCTGCTG CTGGCCACCC CCGCCTGCCT GCCGCTGGGC
ATTCCCTGCC CCTGGCCGGT GATCCTGCTG CTGCCACGCG AGCCGACGCA GGCGCCGGCC
GGCGTGGTCG ACTGGCTGGC CGCCGAGCAA CTCTCCGAAG ACGGCCTGCG CCGCTGCCTG
CGCTACGCCC GCGAGCGCAT GGGCCTGCAG GCGACCCTGC AACTGCTCGC CGAACAGGAC
CCGCTGACCG GCATCGCCAA CCGCCAGGGC TTCCAGACCC TGCTCGCGGC GCGCCTGAGC
GAATTCGACG GGCGTGGCCT GGTGCTCGGC CACCTCGACC TGGACAACTT CCGCCATGTC
AACGACGCCC TTGGCCACCA GGGTGGCGAC CGCCTGATCC TGCAGGTGGT CAACCGCCTG
CGTGGCTTCA TGGAGAACGG CGACCGCCTG GCGCGCCTGG GCAGCGACGA GTTCGCCCTG
CTGCTGGACA CCCGTCGCGA TCCGCAGCGT GCCGAGCGGA TCGCCGAACG GATCGTCGAG
TGCCTCGGTG AGCCCTATTG GGTCGACGGC GAAAGCATCC TTCTGGGCTG CAGCCTGGGG
CTTGCCCACG CCCGCGCCGA CGAGGGCGCC GACCCGCTGA TGTGGCACGC GCACATCGCC
ATGCAGCAGG CCAAGAGCCG CCAGGGCTGC ACTTTCCATG TCTTCGACGA GCGGATCAAT
CGCGGCGTGC GCAGCCTCGC CGACCTCGAG GCCGAACTGC GCCGCGCCCT GCGCCGCGAC
GAGCTGGAGC TGCATTACCA ACCGCGCCTG TGCCTGGACA GCGGGCGCAT CGTCGGCCTG
GAAGCGCTGG TACGCTGGCG CCACGGCGAG CGCGGCCTGC TCACGCCCAG CGATTTCGTG
CCGCTGGCCG AGGAGAGCGG GCTGATCGTG CCGCTCGGCT ACTGGGTCAT CGCCCGCGCC
CTGCGCGACA TGCAGTGGCT CAATGGCCGC GGCCTGGCGC CATTGCACAT GGCGGTGAAC
CTGTCGTTCC GCCAGTTTCA GGACAGCCAG CTGCTGCCGA CCCTGCAACG GCTGATCGAG
GAGCACGGCG TGGACGCGCG CTGGCTCGAA TTCGAACTGA CCGAGACCGC CGTGATGCGC
CGCAGCGACC AGGTCCTGCA GACCATGCAG GCGCTCGGCC GGCTGGGCGT GCGCTTTTCG
CTGGACGACT TCGGCACCGG TTTCTCCTCT TTCGTCCATC TCAACAGCCT GCCGATCACC
CTGCTGAAGA TCGACCGCAG CTTCGTCGGT GGCATGGACC TGCGCGCGGA GAACTTCCAG
TTGGTGCGGG CAATGATCAA CCTGGCGCAC AACCTCAACC TGGAGGTGGT CGCCGAGGGC
GTGGAGACCC TGCGCCAGCA GGAGCAACTG CGTGACTTCG GCTGCGACCA GGTGCAGGGC
TACTGGATCA GCCGGCCGCT GCCGCTGGCC GAGCTGGCAC GCTTCCTCGA GCCCGGCGAG
CGGCCGGGCC GCGAGATGCC GCTCAGCAGT TGA
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| Protein sequence | MRLLLLADTP DWAPLLGERL RALGPAFSLS VVSTWEGAAT LFAAEPQGLL LATPACLPLG
IPCPWPVILL LPREPTQAPA GVVDWLAAEQ LSEDGLRRCL RYARERMGLQ ATLQLLAEQD
PLTGIANRQG FQTLLAARLS EFDGRGLVLG HLDLDNFRHV NDALGHQGGD RLILQVVNRL
RGFMENGDRL ARLGSDEFAL LLDTRRDPQR AERIAERIVE CLGEPYWVDG ESILLGCSLG
LAHARADEGA DPLMWHAHIA MQQAKSRQGC TFHVFDERIN RGVRSLADLE AELRRALRRD
ELELHYQPRL CLDSGRIVGL EALVRWRHGE RGLLTPSDFV PLAEESGLIV PLGYWVIARA
LRDMQWLNGR GLAPLHMAVN LSFRQFQDSQ LLPTLQRLIE EHGVDARWLE FELTETAVMR
RSDQVLQTMQ ALGRLGVRFS LDDFGTGFSS FVHLNSLPIT LLKIDRSFVG GMDLRAENFQ
LVRAMINLAH NLNLEVVAEG VETLRQQEQL RDFGCDQVQG YWISRPLPLA ELARFLEPGE
RPGREMPLSS
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