Gene PSPA7_5982 details

Gene Information

• Locus tag: PSPA7_5982
• Symbol: rho
• ID: 5359700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 6180972
• End bp: 6182231
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640815026
• Product: transcription termination factor Rho
• Protein accession: YP_001351298
• Protein GI: 152988902
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTGA CCGAACTCAA GCAAAAGCCG ATTGCCGAAC TGCTGGAAAT GTCCGATGCC 
ATGGGCCTGG AAAACATGGC CCGTTCGCGC AAGCAGGACA TCATCTTCGC CCTGCTGAAG 
AAGCACGCGA AAAGTGGTGA AGAGATCTCC GGCGATGGCG TGCTGGAGAT TCTTCAGGAC 
GGCTTCGGCT TCCTGCGCTC CGCCGACTCT TCCTACCTGG CCGGTCCCGA CGACATCTAC 
GTGTCGCCGA GCCAGATCCG GCGCTTCAAC CTGCGCACGG GCGACACCAT CATCGGCAAG 
ATTCGCCCGC CGAAAGAGGG TGAGCGCTAT TTCGCCCTGC TCAAGGTCGA TTCGATCAAC 
TTCGATCGCC CGGAGAACGC GAAGAACAAG ATCCTCTTCG AGAACCTCAC GCCGCTGTTC 
CCCAACGAGC GGATGAAGAT GGAGGCCGGC AACGGCTCCA CCGAAGACCT GACCGGCCGC 
GTCATCGACC TCTGCGCGCC GATCGGCAAG GGCCAGCGTG GCCTGATCGT GGCACCGCCG 
AAGGCGGGCA AGACCATCAT GCTGCAGAAC ATCGCCAGCA ACATCACCCG CAACAATCCC 
GAATGCCACC TGATCGTCCT GCTGATCGAC GAACGCCCTG AGGAAGTGAC CGAAATGCAG 
CGCACCGTGC GCGGCGAAGT GGTCGCCTCG ACCTTTGACG AGCCGCCGAC CCGGCACGTG 
CAGGTCGCCG AGATGGTCAT CGAGAAGGCC AAGCGCCTGG TCGAGCACAA GAAGGACGTG 
GTCATCCTGC TCGACTCCAT CACCCGCCTG GCGCGGGCCT ACAACACCGT GATCCCGAGT 
TCCGGCAAGG TCCTCACCGG CGGTGTCGAC GCCCATGCCC TGGAGAAGCC GAAGCGCTTC 
TTCGGCGCCG CGCGGAACAT CGAGGAAGGC GGTTCTCTTA CGATTCTCGC CACGGCGCTG 
GTGGAAACCG GCTCGAAGAT GGACGAGGTG ATCTACGAGG AATTCAAGGG CACCGGTAAC 
ATGGAGCTTC CGCTGGATCG CAAGATCGCC GAAAAGCGTG TGTTCCCGGC CATCAACATC 
AACCGCTCCG GTACCCGTCG CGAAGAACTG CTGACCAGCG AGGACGAACT GCAGCGGATG 
TGGATCCTGC GCAAGATCCT GCACCCGATG GACGAGATTT CCGCCATCGA GTTCCTCATC 
GACAAGCTCA AGCAGACCAA GACCAACGAT GAGTTCTTCG ATTCGATGAA ACGGAAGTAG 

 

Protein sequence

MNLTELKQKP IAELLEMSDA MGLENMARSR KQDIIFALLK KHAKSGEEIS GDGVLEILQD 
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTIIGK IRPPKEGERY FALLKVDSIN 
FDRPENAKNK ILFENLTPLF PNERMKMEAG NGSTEDLTGR VIDLCAPIGK GQRGLIVAPP 
KAGKTIMLQN IASNITRNNP ECHLIVLLID ERPEEVTEMQ RTVRGEVVAS TFDEPPTRHV 
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD AHALEKPKRF 
FGAARNIEEG GSLTILATAL VETGSKMDEV IYEEFKGTGN MELPLDRKIA EKRVFPAINI 
NRSGTRREEL LTSEDELQRM WILRKILHPM DEISAIEFLI DKLKQTKTND EFFDSMKRK