| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5908 |
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| Symbol | |
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| ID | 5354810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 6101273 |
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| End bp | 6102556 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640814953 |
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| Product | C4-dicarboxylate transporter |
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| Protein accession | YP_001351225 |
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| Protein GI | 152986572 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.75076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC TGTTCCTCTT CCTGCTGCTG TTCCTGCTGA TGTTCATCGG CGTGCCGATC
GCCGTCTCCC TGGGGCTTTC CGGCGCGCTG ACGATCCTGC TGTTCAGTCC CGACTCGGTG
CGCTCGCTGG CGATCAAGCT GTTCGAGACC TCCGAGCACT ACACCCTACT GGCGATCCCG
TTCTTCCTGC TGTCCGGCGC GTTCATGACC ACCGGGGGCG TGGCGCGGCG CCTGATCGAC
TTCGCCAACG CCTGCGTCGG ACACATACGT GGCGGCCTGG CGATCGCCGC GGTGCTCGCC
TGCATGCTGT TCGCCGCGCT GTCCGGCTCG TCGCCGGCGA CGGTGGCGGC GGTCGGTTCG
ATCGCCATCG CCGGCATGGT CCGCTCGGGT TATCCACAGG CGTTCGGCGC CGGCATCGTC
TGCAACGCCG GCACCCTCGG CATCCTCATC CCGCCATCGA TCGTCATGGT GGTCTACGCC
GCGGCGACCG AGACCTCGGT CGGCAAGCTG TTCATGGCCG GCGTGGTTCC CGGCCTACTG
CTGGGCCTGA TCCTGATGGT GGTGATCTAC ATCGTCGCGC GAGTGAAGAA GCTTCCGGCG
ATGCCGCGGG TCACCCTGCG CGAGTGGCTG GCCAGCGCAC GCAAGGCGCT GTGGGGCCTG
TTGCTGATGG TGATCATCCT CGGCGGCATC TATTCCGGCG CCTTCACCCC CACCGAGGCC
GCCGCGGTCG CCGCGGTCTA CTCGGCCTTC GTCGCGTTGT TCGTGTACAA GGACATGCGC
CTGAAAGAAT GCCCCAAGGT GCTGCTGGAG TCCGGCAAGC TGACCATCAT GCTGATGTTC
ATCATCGCCA ACGCCATGCT CTTCGCCCAT GTACTGACCA CCGAACAGAT CCCCCAGAGC
ATCGCCGCCT GGGTCACCGA CCTGGGATTA TCACCCTGGA TGTTCCTGCT GGTGGTGAAC
ATCGTGCTGC TGATCGCGGG CAACTTCATG GAGCCTTCGG CGATCATCCT GATCCTGGCG
CCGATCTTCT TCCCCATCGC CATGGAACTG GGTATCGACC CGATCCACCT GGGGATCATC
ATGGTGGTGA ACATGGAGAT CGGCCTGATC ACCCCGCCAG TCGGCCTCAA CCTGTTCGTC
ACCTCGGCGG TCACCGGCAT GCCGCTGGGC GCGACCATCC GCGCGGCGCT GCCGTGGCTG
ATGATCCTGC TGCTGTTCCT GATCATCGTC ACCTACATCC CGGCGGTGTC CATGGCCCTG
CCGAACTGGC TGGGAATGAG CTGA
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| Protein sequence | MTILFLFLLL FLLMFIGVPI AVSLGLSGAL TILLFSPDSV RSLAIKLFET SEHYTLLAIP
FFLLSGAFMT TGGVARRLID FANACVGHIR GGLAIAAVLA CMLFAALSGS SPATVAAVGS
IAIAGMVRSG YPQAFGAGIV CNAGTLGILI PPSIVMVVYA AATETSVGKL FMAGVVPGLL
LGLILMVVIY IVARVKKLPA MPRVTLREWL ASARKALWGL LLMVIILGGI YSGAFTPTEA
AAVAAVYSAF VALFVYKDMR LKECPKVLLE SGKLTIMLMF IIANAMLFAH VLTTEQIPQS
IAAWVTDLGL SPWMFLLVVN IVLLIAGNFM EPSAIILILA PIFFPIAMEL GIDPIHLGII
MVVNMEIGLI TPPVGLNLFV TSAVTGMPLG ATIRAALPWL MILLLFLIIV TYIPAVSMAL
PNWLGMS
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