Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5858 |
Symbol | ntrB |
ID | 5358605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6054987 |
End bp | 6056063 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640814903 |
Product | two-component sensor NtrB |
Protein accession | YP_001351177 |
Protein GI | 152984976 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.299925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGACCG ATACCCTGCA CCGACTGCTG CTCGACAACC TGACCACCGC GGTGATCCTG CTCGATGGCG AGCTGCGCCT GGAGTACATG AACCCGGCGG CGGAGATGCT CCTCGCCGTC AGCGGCCAGC GCAGCCACGG GCAATTCATC AGCGAGCTGT TCACCGAGTC GCCGGAAGCC CTGAACTCGC TGCGCCAGGC AGTGGAACAG GCGCACCCGT TCACCAAGCG CGAAGCCACC CTGACCTCGA TCAGCGGGAT CAGCATCACG GTGGACTATG CGGTGACCCC GATCCTCAAC CGCAACGAGA CCCTGCTGCT GCTCGAAGTC CATCCGCGCG ACCGGCTGAT GCGGATCACC CGCGAAGAGG CGCAGTTGTC CAAGCAGGAG ACCACCAAGC TGCTGGTGCG CGGCCTGGCC CACGAGATCA AGAACCCGCT CGGCGGCATC CGCGGCGCGG CGCAGTTGTT GTCCCGGGAA CTGCCGGAAG AATCGCTGAA GGACTACACC AACGTCATCA TCGAGGAAGC CGACCGACTG CGGAACCTGG TCGACCGCAT GCTCGGCTCG AACAAACTGC CGAACCTGGC GCCGACCAAT ATCCACGAGG TGCTGGAACG GGTCAGCAGC CTGGTGGAGG CGGAAAGCCA GGGCAGCATC ACCCTGGTCC GCGACTACGA CCCGAGCATC CCCGACCTGC TGCTCGACCG CGAGCAAATG ATCCAGGCCG TGCTCAACAT GGTACGCAAC GCCATGCAGG CGATCGCCGG GCAGAACGAC CTGCGCCTGG GTCGCATCAC CCTGCGCAGC CGCACCCTGC GCCAGTTCAC CATCGGCCAC ACGCGGCACC GCTTGGTGTG CAAGGTGGAG ATCATCGACA ACGGCCCGGG CATTCCCGCC GAGCTCCAGG AAACCATCTT CTACCCCATG GTCAGCGGCC GCCCGGACGG TACCGGACTC GGCCTGGCCA TCGCCCAGAA CATCATCAGC CAGCACCAGG GGCTGATTGA ATGCGAGAGC CACCCCGGCC ATACCGTGTT CAGTCTGTTC CTGCCCCTGG AACAAGGAGT GCATTGA
|
Protein sequence | MPTDTLHRLL LDNLTTAVIL LDGELRLEYM NPAAEMLLAV SGQRSHGQFI SELFTESPEA LNSLRQAVEQ AHPFTKREAT LTSISGISIT VDYAVTPILN RNETLLLLEV HPRDRLMRIT REEAQLSKQE TTKLLVRGLA HEIKNPLGGI RGAAQLLSRE LPEESLKDYT NVIIEEADRL RNLVDRMLGS NKLPNLAPTN IHEVLERVSS LVEAESQGSI TLVRDYDPSI PDLLLDREQM IQAVLNMVRN AMQAIAGQND LRLGRITLRS RTLRQFTIGH TRHRLVCKVE IIDNGPGIPA ELQETIFYPM VSGRPDGTGL GLAIAQNIIS QHQGLIECES HPGHTVFSLF LPLEQGVH
|
| |