Gene PSPA7_5781 details

Gene Information

• Locus tag: PSPA7_5781
• Symbol: pilM
• ID: 5358512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 5972056
• End bp: 5973144
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640814826
• Product: type 4 fimbrial biogenesis protein PilM
• Protein accession: YP_001351100
• Protein GI: 152988867
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4972] Tfp pilus assembly protein, ATPase PilM
• TIGRFAM ID: [TIGR01175] type IV pilus assembly protein PilM

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACGCTA ATAGGGAATT GGTCGTGCTA GGGCTCATAA AAAAGAAAGC GAATACCTTA 
CTGGGGATCG ACATCAGCTC GACCTCGGTA AAGCTCCTTG AGTTGAGCCG CTCCGGAGGC 
CGCTACAAAG TGGAGGCCTA TGCCGTCGAG CCGCTTCCGC CGAACGCAGT CGTGGAAAAG 
AACATCGTCG AGCTGGAAGG GGTCGGCCAG GCGTTGTCAC GGGTGCTGGT CAAGGCGAAA 
ACCAACCTGA AATCGGCCGT GGTGGCCGTC GCCGGTTCGG CGGTGATCAC CAAGACGATC 
GAGATGGAGG CTGGGCTTTC CGAGGACGAA CTGGAAAACC AGCTGAAGAT CGAGGCCGAC 
CAGTACATCC CCTATCCGCT GGAGGAGGTC GCCATCGACT TCGAGGTCCA GGGTCTTTCC 
GCGCGCAATC CCGAGCGCGT GGACGTGCTC CTGGCCGCCT GTCGGAAAGA GAACGTCGAG 
GTGCGCGAAG CGGCCCTGGC GCTGGCCGGC CTGACCGCCA AGGTGGTCGA CGTCGAGGCC 
TACGCGCTGG AGCGTTCCTA TGCGCTGCTG AGCAGCCAGC TGGGTGCCGA CACCGACCAG 
TTGACCGTGG CGGTGGTGGA CATCGGCGCG ACCATGACCA CGCTCAGCGT CCTGCACAAC 
GGCCGCACCA TCTATACCCG CGAGCAGTTG TTCGGCGGAC GCCAGCTCAC CGAGGAGATC 
CAGCGGCGCT ACGGGCTTTC GGTGGAGGAA GCCGGTCTCG CCAAGAAGCA GGGTGGTCTT 
CCGGATGACT ACGACAGCGA AGTCCTGCGT CCGTTCAAGG ACGCCGTGGT CCAGCAGGTT 
TCCCGTTCGC TGCAGTTCTT CTTCGCCGCC GGCCAGTTCA ATGACGTCGA CTACATCGTC 
CTGGCGGGCG GCACGGCGTC GATCCAGGAC CTCGACCGGC TGATCCAGCA GAAGATCGGC 
ACCCCGACCC TGGTCGCCAA CCCGTTCGCC GACATGGCGC TGAACGGCAA GGTGAACGCC 
GGTGCCCTGG CCAGCGACGC GCCGGCGTTG ATGATCGCCT GCGGCCTGGC GTTGAGGAGT 
TTCGACTGA 

 

Protein sequence

MNANRELVVL GLIKKKANTL LGIDISSTSV KLLELSRSGG RYKVEAYAVE PLPPNAVVEK 
NIVELEGVGQ ALSRVLVKAK TNLKSAVVAV AGSAVITKTI EMEAGLSEDE LENQLKIEAD 
QYIPYPLEEV AIDFEVQGLS ARNPERVDVL LAACRKENVE VREAALALAG LTAKVVDVEA 
YALERSYALL SSQLGADTDQ LTVAVVDIGA TMTTLSVLHN GRTIYTREQL FGGRQLTEEI 
QRRYGLSVEE AGLAKKQGGL PDDYDSEVLR PFKDAVVQQV SRSLQFFFAA GQFNDVDYIV 
LAGGTASIQD LDRLIQQKIG TPTLVANPFA DMALNGKVNA GALASDAPAL MIACGLALRS 
FD