Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5495 |
Symbol | |
ID | 5355362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5663941 |
End bp | 5665068 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640814540 |
Product | hypothetical protein |
Protein accession | YP_001350817 |
Protein GI | 152986286 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGC CGATCGAACG CGCCCCGCTG ACTCCCGACC TGAGCCAGGC CCGCTACGCC GTCGACCTCA CCGGCCTGGT GCCGGCGGAG GTCGCCGCGA CACTGCCGCC GCTGCCGCCG AACCACTTCT ACTTCTATCC GCCGGACCCG TTGCTGGAAG GCGACGGCGC GATCACCGCG GTCGAGGACA GCGATCCCTT CGACCAGTAC GTCTACCGCC TGCGCCGGGT GCTCTACCAG GGCCGCACGC GCTGGCAGAA CGTGCTGATC GCCGACACCT ACAACTACGA CCGCGTGCTG ATGCTCGACG GCGCTATCCA GAGCGCCGAG AGCGACGAGT CGCTGTATCA CGAGCTGCTG GTGCAGCCGG CCATGCTCGC CCACGACGAA CCGCGCGACG TGCTGATCAT CGGCGGCGGC GAGGGCGCCA CCCTGCGCGA GGTACTGGCC CATGCCAGCG TACGGCGGGC GGTGATGGTC GATCTCGACC AGGAACTGGT GGAACTGTGC CGCGAACACC TGTTCCAGTG GCACCAGGGC GCCTTCGACG ACCCGCGCTG CGAACTGCTG GCCGAGGACG GCCGCGCCTA TCTCGAACGC GACCCGTCGC TCTTCGACGT GGTCATCATC GACGTCGTCG ACATGCTCGA CAACGGTCCG GCCCAGGCCC TCTACACCCG CCAGTTCTAC GAATTGCTGC ACGCGCGCCT GCGTCCGGGC GGAGTGATCG CGGTGCAGGG CCTGGAGTTC TCCCACAGCG ACGACAAGCC CCACGCCGCT CTCGCCCGCA CCCTGCGCAG CGTCTTCGCC CAGGTCCACA GCTACCGCGC CACGGTGCCT TCGTTCCTCT CGTCCTGGGG CTTCCTGCTG GCCTCCGACT GGCTCGAGCC GAACCACTGG CCGGCCGAGG ACATCGACCG GCGCATCGAA CGCAAGCTCG GCCCGCAGTG GCTCGACCAC CTCGACGGCG ACTACCTCAA GGCCTGCTTC GTGATGGACC GCGAAACCCG CTTCCTGCTC GCCCAGCCGG GGCCGGTCCT GGAGGATGGC GTGCCCTTCG TCGCACCGCC GGACATCGAA GAGATCGAAT TCGGCCCGGC GCAACTGCCG GCCCTGGCGA GGACCTGA
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Protein sequence | MDTPIERAPL TPDLSQARYA VDLTGLVPAE VAATLPPLPP NHFYFYPPDP LLEGDGAITA VEDSDPFDQY VYRLRRVLYQ GRTRWQNVLI ADTYNYDRVL MLDGAIQSAE SDESLYHELL VQPAMLAHDE PRDVLIIGGG EGATLREVLA HASVRRAVMV DLDQELVELC REHLFQWHQG AFDDPRCELL AEDGRAYLER DPSLFDVVII DVVDMLDNGP AQALYTRQFY ELLHARLRPG GVIAVQGLEF SHSDDKPHAA LARTLRSVFA QVHSYRATVP SFLSSWGFLL ASDWLEPNHW PAEDIDRRIE RKLGPQWLDH LDGDYLKACF VMDRETRFLL AQPGPVLEDG VPFVAPPDIE EIEFGPAQLP ALART
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