Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5491 |
Symbol | lldD |
ID | 5354272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5659207 |
End bp | 5660352 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640814536 |
Product | L-lactate dehydrogenase |
Protein accession | YP_001350813 |
Protein GI | 152986454 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.316989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCATTT CCGCCTCTAC CGACTACCGC GCCGCCGCCC AACGCAAGCT GCCGCCGTTC CTCTTCCACT ACATCGACGG CGGCGCCTAC GCCGAATACA CCCTGCGGCG CAACGTCGAG GACCTGTCGG CCATCGCCCT GCGCCAGCGG GTGTTGAAGA ACATGTCCGA GCTGAGCCTG GAGACCCGCC TGTTCGACGA GACCCTGGCG ATGCCGGTGG CGCTCGCCCC GGTCGGCCTC ACCGGCATGT ACGCCCGCCG CGGCGAGGTC CAGGCGGCGC GCGCGGCAGC GGCGAAGGGC GTGCCCTTCA CCCTGTCGAC GGTGTCGGTC TGCCCGATCG AGGAAGTCGC CCCGGCCATC GACCGGCCGA TGTGGTTCCA GCTCTACGTG CTCAAGGACC GCGGCTTCAT GCGCAACGCC CTGGAGCGGG CCAAGGCCGC CGGCGTCACC ACCCTGGTGT TCACCGTCGA CATGCCGGTC CCCGGCGCCC GCTACCGCGA CGCCCATTCG GGCATGAGCG GCCCCTACGC CGCCCCGCGC CGCATCCTCC AGGCCATGAC CCACCCCGCC TGGGCCTGGG ATGTCGGCCT GCTGGGCAAG CCCCACGACC TCGGCAACAT CTCCACCTAC CGCGGCAACC CGACCGGCCT GGAGGACTAC ATCGGCTGGC TGGGCGCCAA CTTCGACCCG TCGATTTCCT GGAAAGACCT GGAGTGGATC CGTGAATTCT GGAACGGGCC GATGGTGATC AAGGGCATCC TCGATCCCGA GGACGCGAAG GACGCGGTGA AGTTCGGCGC CGACGGCATC GTCGTCTCCA ACCACGGTGG CCGCCAGCTC GACGGCGTGC TCTCCAGCGC CCGCGCGCTG CCGGCGATCG CCGACGCGGT GAAGGGCGAG CTGGCGATCC TCGCCGACTC CGGCATCCGC ACCGGTCTCG ACGTGGTGCG GATGATCGCC CTCGGCGCCG ACAGCGTGCT GCTCGGCCGC GCCTTCGTCT ATGCCCTGGC CGCCGCCGGC GAGGCCGGGG TGCGCAACCT GCTCGAGCTG ATCGAAAAGG AAATGCGCGT GGCCATGGTC CTCACCGGGG CCAAGTCGAT CGGCGAGATC AGCGCCGACT CTCTGGTCCG CGAACTGGGC GCCTGA
|
Protein sequence | MIISASTDYR AAAQRKLPPF LFHYIDGGAY AEYTLRRNVE DLSAIALRQR VLKNMSELSL ETRLFDETLA MPVALAPVGL TGMYARRGEV QAARAAAAKG VPFTLSTVSV CPIEEVAPAI DRPMWFQLYV LKDRGFMRNA LERAKAAGVT TLVFTVDMPV PGARYRDAHS GMSGPYAAPR RILQAMTHPA WAWDVGLLGK PHDLGNISTY RGNPTGLEDY IGWLGANFDP SISWKDLEWI REFWNGPMVI KGILDPEDAK DAVKFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGE LAILADSGIR TGLDVVRMIA LGADSVLLGR AFVYALAAAG EAGVRNLLEL IEKEMRVAMV LTGAKSIGEI SADSLVRELG A
|
| |